Protein–RNA interactions for Protein: Q6T3U4

Npc1l1, Niemann-Pick C1-like protein 1, mousemouse

Predictions only

Length 1,333 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1l1Q6T3U4 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC22.48■■□□□ 1.19
Npc1l1Q6T3U4 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
Npc1l1Q6T3U4 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Npc1l1Q6T3U4 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Npc1l1Q6T3U4 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Npc1l1Q6T3U4 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Npc1l1Q6T3U4 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Npc1l1Q6T3U4 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Npc1l1Q6T3U4 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
Npc1l1Q6T3U4 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Npc1l1Q6T3U4 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC22.47■■□□□ 1.19
Npc1l1Q6T3U4 Gm44878-201ENSMUST00000205812 1295 ntBASIC22.47■■□□□ 1.19
Npc1l1Q6T3U4 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Npc1l1Q6T3U4 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC22.47■■□□□ 1.19
Npc1l1Q6T3U4 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Npc1l1Q6T3U4 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
Npc1l1Q6T3U4 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Npc1l1Q6T3U4 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC22.46■■□□□ 1.19
Npc1l1Q6T3U4 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC22.46■■□□□ 1.19
Npc1l1Q6T3U4 Rab3c-203ENSMUST00000224180 967 ntBASIC22.46■■□□□ 1.19
Npc1l1Q6T3U4 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Npc1l1Q6T3U4 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Npc1l1Q6T3U4 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Npc1l1Q6T3U4 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Npc1l1Q6T3U4 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Npc1l1Q6T3U4 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Npc1l1Q6T3U4 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Npc1l1Q6T3U4 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Npc1l1Q6T3U4 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Npc1l1Q6T3U4 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC22.45■■□□□ 1.18
Npc1l1Q6T3U4 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC22.45■■□□□ 1.18
Npc1l1Q6T3U4 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Npc1l1Q6T3U4 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Npc1l1Q6T3U4 Gm37563-201ENSMUST00000192580 1513 ntBASIC22.45■■□□□ 1.18
Npc1l1Q6T3U4 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Npc1l1Q6T3U4 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Npc1l1Q6T3U4 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Npc1l1Q6T3U4 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Npc1l1Q6T3U4 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Npc1l1Q6T3U4 Gm10812-201ENSMUST00000099864 546 ntBASIC22.44■■□□□ 1.18
Npc1l1Q6T3U4 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Npc1l1Q6T3U4 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
Npc1l1Q6T3U4 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Npc1l1Q6T3U4 Gm10167-201ENSMUST00000150411 1479 ntBASIC22.43■■□□□ 1.18
Npc1l1Q6T3U4 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
Npc1l1Q6T3U4 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC22.43■■□□□ 1.18
Npc1l1Q6T3U4 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Npc1l1Q6T3U4 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC22.43■■□□□ 1.18
Npc1l1Q6T3U4 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Npc1l1Q6T3U4 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Npc1l1Q6T3U4 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Npc1l1Q6T3U4 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Npc1l1Q6T3U4 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Npc1l1Q6T3U4 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Npc1l1Q6T3U4 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Npc1l1Q6T3U4 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Npc1l1Q6T3U4 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Npc1l1Q6T3U4 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Npc1l1Q6T3U4 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Npc1l1Q6T3U4 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Npc1l1Q6T3U4 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC22.42■■□□□ 1.18
Npc1l1Q6T3U4 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC22.42■■□□□ 1.18
Npc1l1Q6T3U4 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Npc1l1Q6T3U4 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Npc1l1Q6T3U4 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Npc1l1Q6T3U4 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Npc1l1Q6T3U4 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Npc1l1Q6T3U4 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Npc1l1Q6T3U4 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Npc1l1Q6T3U4 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
Npc1l1Q6T3U4 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Npc1l1Q6T3U4 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Npc1l1Q6T3U4 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Npc1l1Q6T3U4 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Npc1l1Q6T3U4 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Npc1l1Q6T3U4 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Npc1l1Q6T3U4 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Npc1l1Q6T3U4 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Npc1l1Q6T3U4 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Npc1l1Q6T3U4 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Npc1l1Q6T3U4 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
Npc1l1Q6T3U4 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Npc1l1Q6T3U4 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Npc1l1Q6T3U4 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Npc1l1Q6T3U4 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Npc1l1Q6T3U4 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Npc1l1Q6T3U4 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Npc1l1Q6T3U4 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC22.4■■□□□ 1.18
Npc1l1Q6T3U4 Gm13509-201ENSMUST00000119733 1308 ntBASIC22.4■■□□□ 1.18
Npc1l1Q6T3U4 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Npc1l1Q6T3U4 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Npc1l1Q6T3U4 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Npc1l1Q6T3U4 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Npc1l1Q6T3U4 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Npc1l1Q6T3U4 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Npc1l1Q6T3U4 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Npc1l1Q6T3U4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Npc1l1Q6T3U4 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC22.39■■□□□ 1.18
Npc1l1Q6T3U4 Mir7071-201ENSMUST00000184847 69 ntBASIC22.39■■□□□ 1.18
Npc1l1Q6T3U4 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC22.39■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms