Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Scn10aQ6QIY3 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scn10aQ6QIY3 Gm15375-201ENSMUST00000119510 849 ntBASIC21.47■■□□□ 1.03
Scn10aQ6QIY3 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Scn10aQ6QIY3 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Scn10aQ6QIY3 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
Scn10aQ6QIY3 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scn10aQ6QIY3 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Scn10aQ6QIY3 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Scn10aQ6QIY3 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC21.46■■□□□ 1.03
Scn10aQ6QIY3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scn10aQ6QIY3 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Scn10aQ6QIY3 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC21.45■■□□□ 1.02
Scn10aQ6QIY3 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Scn10aQ6QIY3 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Scn10aQ6QIY3 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Scn10aQ6QIY3 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.45■■□□□ 1.02
Scn10aQ6QIY3 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Scn10aQ6QIY3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Scn10aQ6QIY3 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.45■■□□□ 1.02
Scn10aQ6QIY3 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Scn10aQ6QIY3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Scn10aQ6QIY3 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Scn10aQ6QIY3 AC107452.1-201ENSMUST00000227963 481 ntBASIC21.45■■□□□ 1.02
Scn10aQ6QIY3 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
Scn10aQ6QIY3 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scn10aQ6QIY3 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Scn10aQ6QIY3 Gm10138-203ENSMUST00000206952 366 ntBASIC21.44■■□□□ 1.02
Scn10aQ6QIY3 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scn10aQ6QIY3 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Scn10aQ6QIY3 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scn10aQ6QIY3 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Scn10aQ6QIY3 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC21.43■■□□□ 1.02
Scn10aQ6QIY3 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Scn10aQ6QIY3 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Scn10aQ6QIY3 Gm37292-201ENSMUST00000192062 758 ntBASIC21.43■■□□□ 1.02
Scn10aQ6QIY3 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC21.43■■□□□ 1.02
Scn10aQ6QIY3 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scn10aQ6QIY3 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scn10aQ6QIY3 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scn10aQ6QIY3 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scn10aQ6QIY3 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scn10aQ6QIY3 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scn10aQ6QIY3 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Scn10aQ6QIY3 Gm6659-201ENSMUST00000174752 547 ntBASIC21.43■■□□□ 1.02
Scn10aQ6QIY3 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC21.43■■□□□ 1.02
Scn10aQ6QIY3 Timm23-208ENSMUST00000226683 750 ntBASIC21.43■■□□□ 1.02
Scn10aQ6QIY3 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Scn10aQ6QIY3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scn10aQ6QIY3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Scn10aQ6QIY3 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC21.42■■□□□ 1.02
Scn10aQ6QIY3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Scn10aQ6QIY3 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Scn10aQ6QIY3 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Scn10aQ6QIY3 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Scn10aQ6QIY3 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
Scn10aQ6QIY3 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Scn10aQ6QIY3 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scn10aQ6QIY3 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Scn10aQ6QIY3 Gm42545-201ENSMUST00000202755 922 ntBASIC21.41■■□□□ 1.02
Scn10aQ6QIY3 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Scn10aQ6QIY3 Otx2os1-204ENSMUST00000227221 751 ntBASIC21.41■■□□□ 1.02
Scn10aQ6QIY3 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scn10aQ6QIY3 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Scn10aQ6QIY3 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scn10aQ6QIY3 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scn10aQ6QIY3 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scn10aQ6QIY3 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.4■■□□□ 1.02
Scn10aQ6QIY3 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scn10aQ6QIY3 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scn10aQ6QIY3 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Scn10aQ6QIY3 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Scn10aQ6QIY3 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scn10aQ6QIY3 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scn10aQ6QIY3 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scn10aQ6QIY3 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scn10aQ6QIY3 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scn10aQ6QIY3 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scn10aQ6QIY3 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scn10aQ6QIY3 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Scn10aQ6QIY3 Gm12382-201ENSMUST00000122005 922 ntBASIC21.39■■□□□ 1.02
Scn10aQ6QIY3 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Scn10aQ6QIY3 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.02
Scn10aQ6QIY3 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
Scn10aQ6QIY3 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Scn10aQ6QIY3 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
Scn10aQ6QIY3 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Scn10aQ6QIY3 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Scn10aQ6QIY3 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Scn10aQ6QIY3 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC21.39■■□□□ 1.01
Scn10aQ6QIY3 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Scn10aQ6QIY3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.39■■□□□ 1.01
Scn10aQ6QIY3 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Scn10aQ6QIY3 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Scn10aQ6QIY3 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Scn10aQ6QIY3 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Scn10aQ6QIY3 AC156016.1-201ENSMUST00000227190 1035 ntBASIC21.38■■□□□ 1.01
Scn10aQ6QIY3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Scn10aQ6QIY3 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Scn10aQ6QIY3 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms