Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ddx58Q6Q899 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ddx58Q6Q899 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ddx58Q6Q899 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ddx58Q6Q899 Gm2559-201ENSMUST00000201323 363 ntBASIC23.2■■□□□ 1.3
Ddx58Q6Q899 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Ddx58Q6Q899 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Ddx58Q6Q899 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ddx58Q6Q899 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ddx58Q6Q899 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ddx58Q6Q899 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ddx58Q6Q899 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC23.19■■□□□ 1.3
Ddx58Q6Q899 Gm13168-201ENSMUST00000121771 632 ntBASIC23.19■■□□□ 1.3
Ddx58Q6Q899 Gm27275-201ENSMUST00000184318 272 ntBASIC23.19■■□□□ 1.3
Ddx58Q6Q899 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC23.19■■□□□ 1.3
Ddx58Q6Q899 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Ddx58Q6Q899 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Ddx58Q6Q899 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
Ddx58Q6Q899 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Ddx58Q6Q899 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ddx58Q6Q899 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ddx58Q6Q899 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Ddx58Q6Q899 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Ddx58Q6Q899 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC23.16■■□□□ 1.3
Ddx58Q6Q899 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
Ddx58Q6Q899 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Ddx58Q6Q899 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Ddx58Q6Q899 Dio3-201ENSMUST00000097228 1449 ntBASIC23.16■■□□□ 1.3
Ddx58Q6Q899 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ddx58Q6Q899 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ddx58Q6Q899 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC23.15■■□□□ 1.3
Ddx58Q6Q899 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Ddx58Q6Q899 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Ddx58Q6Q899 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
Ddx58Q6Q899 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ddx58Q6Q899 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ddx58Q6Q899 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.29
Ddx58Q6Q899 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ddx58Q6Q899 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ddx58Q6Q899 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ddx58Q6Q899 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Ddx58Q6Q899 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ddx58Q6Q899 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Ddx58Q6Q899 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Ddx58Q6Q899 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ddx58Q6Q899 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC23.13■■□□□ 1.29
Ddx58Q6Q899 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Ddx58Q6Q899 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Ddx58Q6Q899 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ddx58Q6Q899 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
Ddx58Q6Q899 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Ddx58Q6Q899 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Ddx58Q6Q899 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ddx58Q6Q899 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ddx58Q6Q899 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ddx58Q6Q899 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Ddx58Q6Q899 Gm18688-201ENSMUST00000204695 1859 ntBASIC23.12■■□□□ 1.29
Ddx58Q6Q899 Gm8309-201ENSMUST00000206627 1448 ntBASIC23.12■■□□□ 1.29
Ddx58Q6Q899 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Ddx58Q6Q899 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC23.12■■□□□ 1.29
Ddx58Q6Q899 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Ddx58Q6Q899 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
Ddx58Q6Q899 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Ddx58Q6Q899 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ddx58Q6Q899 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ddx58Q6Q899 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ddx58Q6Q899 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Ddx58Q6Q899 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ddx58Q6Q899 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ddx58Q6Q899 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ddx58Q6Q899 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Ddx58Q6Q899 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC23.11■■□□□ 1.29
Ddx58Q6Q899 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ddx58Q6Q899 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ddx58Q6Q899 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC23.1■■□□□ 1.29
Ddx58Q6Q899 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ddx58Q6Q899 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ddx58Q6Q899 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ddx58Q6Q899 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC23.1■■□□□ 1.29
Ddx58Q6Q899 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ddx58Q6Q899 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Ddx58Q6Q899 AC140264.2-202ENSMUST00000218746 817 ntBASIC23.1■■□□□ 1.29
Ddx58Q6Q899 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ddx58Q6Q899 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Ddx58Q6Q899 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Ddx58Q6Q899 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ddx58Q6Q899 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ddx58Q6Q899 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ddx58Q6Q899 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ddx58Q6Q899 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ddx58Q6Q899 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ddx58Q6Q899 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Ddx58Q6Q899 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Ddx58Q6Q899 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ddx58Q6Q899 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC23.08■■□□□ 1.29
Ddx58Q6Q899 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ddx58Q6Q899 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ddx58Q6Q899 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC23.08■■□□□ 1.29
Ddx58Q6Q899 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
Ddx58Q6Q899 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms