Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.75■□□□□ 0.91
Dhx40Q6PE54 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.75■□□□□ 0.91
Dhx40Q6PE54 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Dhx40Q6PE54 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Dhx40Q6PE54 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Dhx40Q6PE54 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Dhx40Q6PE54 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Dhx40Q6PE54 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Dhx40Q6PE54 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Dhx40Q6PE54 Gm45906-201ENSMUST00000208911 1430 ntBASIC20.74■□□□□ 0.91
Dhx40Q6PE54 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Dhx40Q6PE54 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Dhx40Q6PE54 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Dhx40Q6PE54 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Dhx40Q6PE54 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Dhx40Q6PE54 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Dhx40Q6PE54 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Dhx40Q6PE54 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC20.73■□□□□ 0.91
Dhx40Q6PE54 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Dhx40Q6PE54 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Dhx40Q6PE54 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Dhx40Q6PE54 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Dhx40Q6PE54 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
Dhx40Q6PE54 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.73■□□□□ 0.91
Dhx40Q6PE54 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Dhx40Q6PE54 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Dhx40Q6PE54 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Dhx40Q6PE54 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Dhx40Q6PE54 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Dhx40Q6PE54 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
Dhx40Q6PE54 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Dhx40Q6PE54 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Dhx40Q6PE54 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.73■□□□□ 0.91
Dhx40Q6PE54 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Dhx40Q6PE54 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Dhx40Q6PE54 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Dhx40Q6PE54 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Dhx40Q6PE54 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Dhx40Q6PE54 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Dhx40Q6PE54 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Dhx40Q6PE54 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Dhx40Q6PE54 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Dhx40Q6PE54 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Dhx40Q6PE54 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Dhx40Q6PE54 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.71■□□□□ 0.91
Dhx40Q6PE54 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Dhx40Q6PE54 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Dhx40Q6PE54 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Dhx40Q6PE54 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Dhx40Q6PE54 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Dhx40Q6PE54 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.71■□□□□ 0.91
Dhx40Q6PE54 Gm45417-201ENSMUST00000209533 758 ntBASIC20.71■□□□□ 0.91
Dhx40Q6PE54 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Dhx40Q6PE54 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Dhx40Q6PE54 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Dhx40Q6PE54 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Dhx40Q6PE54 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Dhx40Q6PE54 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Dhx40Q6PE54 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Dhx40Q6PE54 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Dhx40Q6PE54 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Dhx40Q6PE54 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Dhx40Q6PE54 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Dhx40Q6PE54 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.7■□□□□ 0.9
Dhx40Q6PE54 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Dhx40Q6PE54 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.7■□□□□ 0.9
Dhx40Q6PE54 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Dhx40Q6PE54 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Dhx40Q6PE54 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Dhx40Q6PE54 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Dhx40Q6PE54 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Dhx40Q6PE54 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Dhx40Q6PE54 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.7■□□□□ 0.9
Dhx40Q6PE54 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Dhx40Q6PE54 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Dhx40Q6PE54 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Dhx40Q6PE54 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Dhx40Q6PE54 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Dhx40Q6PE54 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Dhx40Q6PE54 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.69■□□□□ 0.9
Dhx40Q6PE54 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Dhx40Q6PE54 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.69■□□□□ 0.9
Dhx40Q6PE54 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.69■□□□□ 0.9
Dhx40Q6PE54 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Dhx40Q6PE54 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Dhx40Q6PE54 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Dhx40Q6PE54 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Dhx40Q6PE54 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Dhx40Q6PE54 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Dhx40Q6PE54 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Dhx40Q6PE54 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Dhx40Q6PE54 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Dhx40Q6PE54 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Dhx40Q6PE54 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Dhx40Q6PE54 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dhx40Q6PE54 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dhx40Q6PE54 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dhx40Q6PE54 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dhx40Q6PE54 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Dhx40Q6PE54 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms