Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Ccdc85bQ6PDY0 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Ccdc85bQ6PDY0 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc85bQ6PDY0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc85bQ6PDY0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc85bQ6PDY0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
Ccdc85bQ6PDY0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccdc85bQ6PDY0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc85bQ6PDY0 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ccdc85bQ6PDY0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc85bQ6PDY0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc85bQ6PDY0 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc85bQ6PDY0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc85bQ6PDY0 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.42■□□□□ 0.7
Ccdc85bQ6PDY0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc85bQ6PDY0 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc85bQ6PDY0 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc85bQ6PDY0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc85bQ6PDY0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc85bQ6PDY0 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.41■□□□□ 0.7
Ccdc85bQ6PDY0 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Ccdc85bQ6PDY0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc85bQ6PDY0 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc85bQ6PDY0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc85bQ6PDY0 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc85bQ6PDY0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc85bQ6PDY0 Notumos-201ENSMUST00000151998 2659 ntBASIC19.41■□□□□ 0.7
Ccdc85bQ6PDY0 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc85bQ6PDY0 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc85bQ6PDY0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc85bQ6PDY0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc85bQ6PDY0 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC19.4■□□□□ 0.7
Ccdc85bQ6PDY0 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC19.4■□□□□ 0.7
Ccdc85bQ6PDY0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc85bQ6PDY0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Ccdc85bQ6PDY0 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.4■□□□□ 0.7
Ccdc85bQ6PDY0 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc85bQ6PDY0 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc85bQ6PDY0 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.4■□□□□ 0.7
Ccdc85bQ6PDY0 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.4■□□□□ 0.7
Ccdc85bQ6PDY0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc85bQ6PDY0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Ccdc85bQ6PDY0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc85bQ6PDY0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc85bQ6PDY0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC19.39■□□□□ 0.69
Ccdc85bQ6PDY0 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC19.39■□□□□ 0.69
Ccdc85bQ6PDY0 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Ccdc85bQ6PDY0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc85bQ6PDY0 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc85bQ6PDY0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc85bQ6PDY0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc85bQ6PDY0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc85bQ6PDY0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC19.38■□□□□ 0.69
Ccdc85bQ6PDY0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ccdc85bQ6PDY0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc85bQ6PDY0 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Ccdc85bQ6PDY0 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc85bQ6PDY0 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc85bQ6PDY0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc85bQ6PDY0 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.38■□□□□ 0.69
Ccdc85bQ6PDY0 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc85bQ6PDY0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc85bQ6PDY0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc85bQ6PDY0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ccdc85bQ6PDY0 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc85bQ6PDY0 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Ccdc85bQ6PDY0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc85bQ6PDY0 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc85bQ6PDY0 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc85bQ6PDY0 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.37■□□□□ 0.69
Ccdc85bQ6PDY0 Gm11539-201ENSMUST00000119837 557 ntBASIC19.37■□□□□ 0.69
Ccdc85bQ6PDY0 Gm13436-201ENSMUST00000120418 567 ntBASIC19.37■□□□□ 0.69
Ccdc85bQ6PDY0 Gm13559-201ENSMUST00000120476 863 ntBASIC19.37■□□□□ 0.69
Ccdc85bQ6PDY0 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc85bQ6PDY0 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Ccdc85bQ6PDY0 Gm7889-201ENSMUST00000185591 958 ntBASIC19.37■□□□□ 0.69
Ccdc85bQ6PDY0 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.37■□□□□ 0.69
Ccdc85bQ6PDY0 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc85bQ6PDY0 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc85bQ6PDY0 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ccdc85bQ6PDY0 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc85bQ6PDY0 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc85bQ6PDY0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc85bQ6PDY0 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc85bQ6PDY0 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc85bQ6PDY0 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.36■□□□□ 0.69
Ccdc85bQ6PDY0 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc85bQ6PDY0 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.36■□□□□ 0.69
Ccdc85bQ6PDY0 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc85bQ6PDY0 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc85bQ6PDY0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.36■□□□□ 0.69
Ccdc85bQ6PDY0 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc85bQ6PDY0 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Ccdc85bQ6PDY0 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc85bQ6PDY0 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc85bQ6PDY0 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc85bQ6PDY0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ccdc85bQ6PDY0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc85bQ6PDY0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ccdc85bQ6PDY0 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms