Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC21.8■■□□□ 1.08
Smarcc2Q6PDG5 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC21.8■■□□□ 1.08
Smarcc2Q6PDG5 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smarcc2Q6PDG5 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smarcc2Q6PDG5 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Smarcc2Q6PDG5 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smarcc2Q6PDG5 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smarcc2Q6PDG5 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Smarcc2Q6PDG5 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC21.79■■□□□ 1.08
Smarcc2Q6PDG5 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Smarcc2Q6PDG5 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Smarcc2Q6PDG5 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smarcc2Q6PDG5 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smarcc2Q6PDG5 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smarcc2Q6PDG5 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Smarcc2Q6PDG5 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC21.79■■□□□ 1.08
Smarcc2Q6PDG5 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smarcc2Q6PDG5 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smarcc2Q6PDG5 Gm7856-201ENSMUST00000117514 1493 ntBASIC21.78■■□□□ 1.08
Smarcc2Q6PDG5 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smarcc2Q6PDG5 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Smarcc2Q6PDG5 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Smarcc2Q6PDG5 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.78■■□□□ 1.08
Smarcc2Q6PDG5 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smarcc2Q6PDG5 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Smarcc2Q6PDG5 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smarcc2Q6PDG5 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smarcc2Q6PDG5 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smarcc2Q6PDG5 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smarcc2Q6PDG5 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smarcc2Q6PDG5 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Smarcc2Q6PDG5 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smarcc2Q6PDG5 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Smarcc2Q6PDG5 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Smarcc2Q6PDG5 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
Smarcc2Q6PDG5 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smarcc2Q6PDG5 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smarcc2Q6PDG5 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC21.76■■□□□ 1.07
Smarcc2Q6PDG5 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.76■■□□□ 1.07
Smarcc2Q6PDG5 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Smarcc2Q6PDG5 CT010467.1-202ENSMUST00000205406 714 ntBASIC21.76■■□□□ 1.07
Smarcc2Q6PDG5 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Smarcc2Q6PDG5 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC21.76■■□□□ 1.07
Smarcc2Q6PDG5 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smarcc2Q6PDG5 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Smarcc2Q6PDG5 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smarcc2Q6PDG5 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smarcc2Q6PDG5 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smarcc2Q6PDG5 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Smarcc2Q6PDG5 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Smarcc2Q6PDG5 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Smarcc2Q6PDG5 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC21.75■■□□□ 1.07
Smarcc2Q6PDG5 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.75■■□□□ 1.07
Smarcc2Q6PDG5 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smarcc2Q6PDG5 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smarcc2Q6PDG5 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Smarcc2Q6PDG5 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Smarcc2Q6PDG5 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smarcc2Q6PDG5 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Smarcc2Q6PDG5 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarcc2Q6PDG5 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Smarcc2Q6PDG5 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC21.74■■□□□ 1.07
Smarcc2Q6PDG5 Gm7514-201ENSMUST00000209475 934 ntBASIC21.74■■□□□ 1.07
Smarcc2Q6PDG5 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC21.74■■□□□ 1.07
Smarcc2Q6PDG5 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarcc2Q6PDG5 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarcc2Q6PDG5 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarcc2Q6PDG5 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarcc2Q6PDG5 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarcc2Q6PDG5 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarcc2Q6PDG5 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarcc2Q6PDG5 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarcc2Q6PDG5 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarcc2Q6PDG5 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarcc2Q6PDG5 Gm37179-201ENSMUST00000194862 823 ntBASIC21.73■■□□□ 1.07
Smarcc2Q6PDG5 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Smarcc2Q6PDG5 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarcc2Q6PDG5 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarcc2Q6PDG5 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Smarcc2Q6PDG5 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarcc2Q6PDG5 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarcc2Q6PDG5 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarcc2Q6PDG5 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smarcc2Q6PDG5 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Smarcc2Q6PDG5 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.72■■□□□ 1.07
Smarcc2Q6PDG5 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Smarcc2Q6PDG5 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smarcc2Q6PDG5 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Smarcc2Q6PDG5 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smarcc2Q6PDG5 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC21.71■■□□□ 1.07
Smarcc2Q6PDG5 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smarcc2Q6PDG5 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smarcc2Q6PDG5 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smarcc2Q6PDG5 Gm13146-201ENSMUST00000118508 780 ntBASIC21.71■■□□□ 1.07
Smarcc2Q6PDG5 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Smarcc2Q6PDG5 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smarcc2Q6PDG5 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.71■■□□□ 1.07
Smarcc2Q6PDG5 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC21.71■■□□□ 1.07
Smarcc2Q6PDG5 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Smarcc2Q6PDG5 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms