Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ShbQ6PD21 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC20.45■□□□□ 0.86
ShbQ6PD21 Gm18032-201ENSMUST00000222541 538 ntBASIC20.45■□□□□ 0.86
ShbQ6PD21 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ShbQ6PD21 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ShbQ6PD21 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ShbQ6PD21 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ShbQ6PD21 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ShbQ6PD21 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ShbQ6PD21 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ShbQ6PD21 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
ShbQ6PD21 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ShbQ6PD21 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
ShbQ6PD21 AA414768-201ENSMUST00000121924 1257 ntBASIC20.44■□□□□ 0.86
ShbQ6PD21 AC159205.6-201ENSMUST00000224935 887 ntBASIC20.44■□□□□ 0.86
ShbQ6PD21 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
ShbQ6PD21 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
ShbQ6PD21 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ShbQ6PD21 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
ShbQ6PD21 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ShbQ6PD21 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ShbQ6PD21 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ShbQ6PD21 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
ShbQ6PD21 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ShbQ6PD21 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ShbQ6PD21 Gm9103-201ENSMUST00000119371 405 ntBASIC20.43■□□□□ 0.86
ShbQ6PD21 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
ShbQ6PD21 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ShbQ6PD21 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ShbQ6PD21 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ShbQ6PD21 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
ShbQ6PD21 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ShbQ6PD21 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
ShbQ6PD21 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ShbQ6PD21 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
ShbQ6PD21 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.42■□□□□ 0.86
ShbQ6PD21 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ShbQ6PD21 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ShbQ6PD21 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.42■□□□□ 0.86
ShbQ6PD21 Ank2-226ENSMUST00000189368 339 ntBASIC20.42■□□□□ 0.86
ShbQ6PD21 Gm18959-201ENSMUST00000208954 655 ntBASIC20.42■□□□□ 0.86
ShbQ6PD21 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
ShbQ6PD21 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ShbQ6PD21 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ShbQ6PD21 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ShbQ6PD21 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.42■□□□□ 0.86
ShbQ6PD21 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ShbQ6PD21 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ShbQ6PD21 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ShbQ6PD21 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC20.41■□□□□ 0.86
ShbQ6PD21 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ShbQ6PD21 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC20.41■□□□□ 0.86
ShbQ6PD21 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ShbQ6PD21 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
ShbQ6PD21 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ShbQ6PD21 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ShbQ6PD21 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ShbQ6PD21 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ShbQ6PD21 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
ShbQ6PD21 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ShbQ6PD21 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ShbQ6PD21 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ShbQ6PD21 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
ShbQ6PD21 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ShbQ6PD21 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
ShbQ6PD21 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ShbQ6PD21 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ShbQ6PD21 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
ShbQ6PD21 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
ShbQ6PD21 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ShbQ6PD21 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC20.39■□□□□ 0.85
ShbQ6PD21 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ShbQ6PD21 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ShbQ6PD21 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ShbQ6PD21 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ShbQ6PD21 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.38■□□□□ 0.85
ShbQ6PD21 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ShbQ6PD21 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC20.38■□□□□ 0.85
ShbQ6PD21 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.38■□□□□ 0.85
ShbQ6PD21 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.38■□□□□ 0.85
ShbQ6PD21 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC20.38■□□□□ 0.85
ShbQ6PD21 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ShbQ6PD21 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ShbQ6PD21 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ShbQ6PD21 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ShbQ6PD21 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ShbQ6PD21 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
ShbQ6PD21 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ShbQ6PD21 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
ShbQ6PD21 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ShbQ6PD21 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.37■□□□□ 0.85
ShbQ6PD21 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ShbQ6PD21 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ShbQ6PD21 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC20.36■□□□□ 0.85
ShbQ6PD21 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
ShbQ6PD21 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ShbQ6PD21 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC20.36■□□□□ 0.85
ShbQ6PD21 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.36■□□□□ 0.85
ShbQ6PD21 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ShbQ6PD21 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms