Protein–RNA interactions for Protein: Q6PCX9

Trim37, E3 ubiquitin-protein ligase TRIM37, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim37Q6PCX9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim37Q6PCX9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Trim37Q6PCX9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim37Q6PCX9 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim37Q6PCX9 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim37Q6PCX9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim37Q6PCX9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim37Q6PCX9 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.68■□□□□ 0.9
Trim37Q6PCX9 Gm15565-201ENSMUST00000118890 427 ntBASIC20.68■□□□□ 0.9
Trim37Q6PCX9 Gm27275-201ENSMUST00000184318 272 ntBASIC20.68■□□□□ 0.9
Trim37Q6PCX9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim37Q6PCX9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim37Q6PCX9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim37Q6PCX9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim37Q6PCX9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim37Q6PCX9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim37Q6PCX9 Gm11643-201ENSMUST00000119578 864 ntBASIC20.67■□□□□ 0.9
Trim37Q6PCX9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.67■□□□□ 0.9
Trim37Q6PCX9 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trim37Q6PCX9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.67■□□□□ 0.9
Trim37Q6PCX9 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim37Q6PCX9 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim37Q6PCX9 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim37Q6PCX9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.66■□□□□ 0.9
Trim37Q6PCX9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Trim37Q6PCX9 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim37Q6PCX9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim37Q6PCX9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim37Q6PCX9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim37Q6PCX9 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim37Q6PCX9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim37Q6PCX9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim37Q6PCX9 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim37Q6PCX9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim37Q6PCX9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Trim37Q6PCX9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim37Q6PCX9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim37Q6PCX9 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.65■□□□□ 0.9
Trim37Q6PCX9 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Trim37Q6PCX9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim37Q6PCX9 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim37Q6PCX9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Trim37Q6PCX9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim37Q6PCX9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim37Q6PCX9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Trim37Q6PCX9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trim37Q6PCX9 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.64■□□□□ 0.89
Trim37Q6PCX9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim37Q6PCX9 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.64■□□□□ 0.89
Trim37Q6PCX9 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Trim37Q6PCX9 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.64■□□□□ 0.89
Trim37Q6PCX9 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.64■□□□□ 0.89
Trim37Q6PCX9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Trim37Q6PCX9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim37Q6PCX9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trim37Q6PCX9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.64■□□□□ 0.89
Trim37Q6PCX9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim37Q6PCX9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.64■□□□□ 0.89
Trim37Q6PCX9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim37Q6PCX9 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.63■□□□□ 0.89
Trim37Q6PCX9 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC20.63■□□□□ 0.89
Trim37Q6PCX9 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Trim37Q6PCX9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Trim37Q6PCX9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim37Q6PCX9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim37Q6PCX9 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim37Q6PCX9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim37Q6PCX9 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim37Q6PCX9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Trim37Q6PCX9 AA386476-201ENSMUST00000098781 1665 ntBASIC20.62■□□□□ 0.89
Trim37Q6PCX9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Trim37Q6PCX9 Gm26524-201ENSMUST00000192339 390 ntBASIC20.62■□□□□ 0.89
Trim37Q6PCX9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim37Q6PCX9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim37Q6PCX9 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim37Q6PCX9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim37Q6PCX9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
Trim37Q6PCX9 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim37Q6PCX9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim37Q6PCX9 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim37Q6PCX9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim37Q6PCX9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim37Q6PCX9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim37Q6PCX9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Trim37Q6PCX9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim37Q6PCX9 Gm5643-201ENSMUST00000117081 966 ntBASIC20.61■□□□□ 0.89
Trim37Q6PCX9 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim37Q6PCX9 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim37Q6PCX9 Rab3c-203ENSMUST00000224180 967 ntBASIC20.61■□□□□ 0.89
Trim37Q6PCX9 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim37Q6PCX9 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Trim37Q6PCX9 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim37Q6PCX9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim37Q6PCX9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim37Q6PCX9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Trim37Q6PCX9 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim37Q6PCX9 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim37Q6PCX9 Gm38205-201ENSMUST00000192243 258 ntBASIC20.6■□□□□ 0.89
Trim37Q6PCX9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.6■□□□□ 0.89
Trim37Q6PCX9 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms