Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Abcf1Q6P542 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.87■□□□□ 0.93
Abcf1Q6P542 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Abcf1Q6P542 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Abcf1Q6P542 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Abcf1Q6P542 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Abcf1Q6P542 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Abcf1Q6P542 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Abcf1Q6P542 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Abcf1Q6P542 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Abcf1Q6P542 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Abcf1Q6P542 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Abcf1Q6P542 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Abcf1Q6P542 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Abcf1Q6P542 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Abcf1Q6P542 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Abcf1Q6P542 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Abcf1Q6P542 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Abcf1Q6P542 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Abcf1Q6P542 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Abcf1Q6P542 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Abcf1Q6P542 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Abcf1Q6P542 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Abcf1Q6P542 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Abcf1Q6P542 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Abcf1Q6P542 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.84■□□□□ 0.93
Abcf1Q6P542 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Abcf1Q6P542 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.84■□□□□ 0.93
Abcf1Q6P542 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Abcf1Q6P542 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Abcf1Q6P542 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Abcf1Q6P542 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.84■□□□□ 0.93
Abcf1Q6P542 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Abcf1Q6P542 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Abcf1Q6P542 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Abcf1Q6P542 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Abcf1Q6P542 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.83■□□□□ 0.93
Abcf1Q6P542 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
Abcf1Q6P542 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Abcf1Q6P542 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Abcf1Q6P542 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.83■□□□□ 0.93
Abcf1Q6P542 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.93
Abcf1Q6P542 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.83■□□□□ 0.93
Abcf1Q6P542 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Abcf1Q6P542 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
Abcf1Q6P542 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Abcf1Q6P542 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Abcf1Q6P542 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Abcf1Q6P542 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Abcf1Q6P542 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.82■□□□□ 0.92
Abcf1Q6P542 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Abcf1Q6P542 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC20.82■□□□□ 0.92
Abcf1Q6P542 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Abcf1Q6P542 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Abcf1Q6P542 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Abcf1Q6P542 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.82■□□□□ 0.92
Abcf1Q6P542 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Abcf1Q6P542 Smad6-203ENSMUST00000179458 273 ntBASIC20.82■□□□□ 0.92
Abcf1Q6P542 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.82■□□□□ 0.92
Abcf1Q6P542 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Abcf1Q6P542 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Abcf1Q6P542 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Abcf1Q6P542 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Abcf1Q6P542 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Abcf1Q6P542 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Abcf1Q6P542 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Abcf1Q6P542 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Abcf1Q6P542 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Abcf1Q6P542 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Abcf1Q6P542 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Abcf1Q6P542 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.82■□□□□ 0.92
Abcf1Q6P542 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
Abcf1Q6P542 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Abcf1Q6P542 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Abcf1Q6P542 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Abcf1Q6P542 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Abcf1Q6P542 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.81■□□□□ 0.92
Abcf1Q6P542 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Abcf1Q6P542 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Abcf1Q6P542 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Abcf1Q6P542 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
Abcf1Q6P542 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.81■□□□□ 0.92
Abcf1Q6P542 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Abcf1Q6P542 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Abcf1Q6P542 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.81■□□□□ 0.92
Abcf1Q6P542 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Abcf1Q6P542 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Abcf1Q6P542 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Abcf1Q6P542 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Abcf1Q6P542 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Abcf1Q6P542 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Abcf1Q6P542 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Abcf1Q6P542 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Abcf1Q6P542 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Abcf1Q6P542 Gm42939-201ENSMUST00000197514 2205 ntBASIC20.8■□□□□ 0.92
Abcf1Q6P542 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Abcf1Q6P542 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Abcf1Q6P542 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Abcf1Q6P542 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.79■□□□□ 0.92
Abcf1Q6P542 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms