Protein–RNA interactions for Protein: Q6P4T2

Snrnp200, U5 small nuclear ribonucleoprotein 200 kDa helicase, mousemouse

Known RBP Predictions only

Length 2,136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp200Q6P4T2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snrnp200Q6P4T2 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snrnp200Q6P4T2 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.72■□□□□ 0.43
Snrnp200Q6P4T2 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.72■□□□□ 0.43
Snrnp200Q6P4T2 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snrnp200Q6P4T2 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snrnp200Q6P4T2 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snrnp200Q6P4T2 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Snrnp200Q6P4T2 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snrnp200Q6P4T2 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.72■□□□□ 0.43
Snrnp200Q6P4T2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snrnp200Q6P4T2 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snrnp200Q6P4T2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snrnp200Q6P4T2 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snrnp200Q6P4T2 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Snrnp200Q6P4T2 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snrnp200Q6P4T2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snrnp200Q6P4T2 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Snrnp200Q6P4T2 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Snrnp200Q6P4T2 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.71■□□□□ 0.43
Snrnp200Q6P4T2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snrnp200Q6P4T2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snrnp200Q6P4T2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.71■□□□□ 0.43
Snrnp200Q6P4T2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Snrnp200Q6P4T2 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Snrnp200Q6P4T2 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Snrnp200Q6P4T2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.71■□□□□ 0.42
Snrnp200Q6P4T2 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Snrnp200Q6P4T2 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snrnp200Q6P4T2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snrnp200Q6P4T2 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snrnp200Q6P4T2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snrnp200Q6P4T2 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snrnp200Q6P4T2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snrnp200Q6P4T2 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snrnp200Q6P4T2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snrnp200Q6P4T2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snrnp200Q6P4T2 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snrnp200Q6P4T2 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snrnp200Q6P4T2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snrnp200Q6P4T2 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snrnp200Q6P4T2 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snrnp200Q6P4T2 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snrnp200Q6P4T2 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snrnp200Q6P4T2 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Snrnp200Q6P4T2 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.7■□□□□ 0.42
Snrnp200Q6P4T2 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snrnp200Q6P4T2 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Snrnp200Q6P4T2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Snrnp200Q6P4T2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.69■□□□□ 0.42
Snrnp200Q6P4T2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Snrnp200Q6P4T2 AC107452.1-201ENSMUST00000227963 481 ntBASIC17.69■□□□□ 0.42
Snrnp200Q6P4T2 Gm10602-201ENSMUST00000098239 609 ntBASIC17.69■□□□□ 0.42
Snrnp200Q6P4T2 Golph3-205ENSMUST00000228671 2842 ntBASIC17.69■□□□□ 0.42
Snrnp200Q6P4T2 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snrnp200Q6P4T2 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Snrnp200Q6P4T2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snrnp200Q6P4T2 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Snrnp200Q6P4T2 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Snrnp200Q6P4T2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snrnp200Q6P4T2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snrnp200Q6P4T2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.69■□□□□ 0.42
Snrnp200Q6P4T2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.69■□□□□ 0.42
Snrnp200Q6P4T2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Snrnp200Q6P4T2 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Snrnp200Q6P4T2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Snrnp200Q6P4T2 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Snrnp200Q6P4T2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Snrnp200Q6P4T2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Snrnp200Q6P4T2 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Snrnp200Q6P4T2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Snrnp200Q6P4T2 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Snrnp200Q6P4T2 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Snrnp200Q6P4T2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Snrnp200Q6P4T2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Snrnp200Q6P4T2 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Snrnp200Q6P4T2 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.68■□□□□ 0.42
Snrnp200Q6P4T2 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Snrnp200Q6P4T2 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Snrnp200Q6P4T2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Snrnp200Q6P4T2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snrnp200Q6P4T2 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snrnp200Q6P4T2 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Snrnp200Q6P4T2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Snrnp200Q6P4T2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.67■□□□□ 0.42
Snrnp200Q6P4T2 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snrnp200Q6P4T2 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Snrnp200Q6P4T2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Snrnp200Q6P4T2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Snrnp200Q6P4T2 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snrnp200Q6P4T2 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snrnp200Q6P4T2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Snrnp200Q6P4T2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC17.66■□□□□ 0.42
Snrnp200Q6P4T2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Snrnp200Q6P4T2 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.66■□□□□ 0.42
Snrnp200Q6P4T2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.66■□□□□ 0.42
Snrnp200Q6P4T2 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Snrnp200Q6P4T2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.66■□□□□ 0.42
Snrnp200Q6P4T2 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Snrnp200Q6P4T2 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms