Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sp140Q6NSQ5 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sp140Q6NSQ5 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sp140Q6NSQ5 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.96■□□□□ 0.63
Sp140Q6NSQ5 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Sp140Q6NSQ5 Gm9988-201ENSMUST00000069786 435 ntBASIC18.96■□□□□ 0.63
Sp140Q6NSQ5 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sp140Q6NSQ5 Reep4-203ENSMUST00000226563 1444 ntBASIC18.96■□□□□ 0.63
Sp140Q6NSQ5 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sp140Q6NSQ5 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sp140Q6NSQ5 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sp140Q6NSQ5 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sp140Q6NSQ5 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sp140Q6NSQ5 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sp140Q6NSQ5 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sp140Q6NSQ5 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Sp140Q6NSQ5 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sp140Q6NSQ5 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sp140Q6NSQ5 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Sp140Q6NSQ5 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.95■□□□□ 0.62
Sp140Q6NSQ5 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
Sp140Q6NSQ5 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sp140Q6NSQ5 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sp140Q6NSQ5 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sp140Q6NSQ5 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sp140Q6NSQ5 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sp140Q6NSQ5 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Sp140Q6NSQ5 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sp140Q6NSQ5 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sp140Q6NSQ5 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.94■□□□□ 0.62
Sp140Q6NSQ5 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sp140Q6NSQ5 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sp140Q6NSQ5 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Sp140Q6NSQ5 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sp140Q6NSQ5 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sp140Q6NSQ5 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sp140Q6NSQ5 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.93■□□□□ 0.62
Sp140Q6NSQ5 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.93■□□□□ 0.62
Sp140Q6NSQ5 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sp140Q6NSQ5 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Sp140Q6NSQ5 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sp140Q6NSQ5 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sp140Q6NSQ5 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sp140Q6NSQ5 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sp140Q6NSQ5 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sp140Q6NSQ5 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sp140Q6NSQ5 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.92■□□□□ 0.62
Sp140Q6NSQ5 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sp140Q6NSQ5 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sp140Q6NSQ5 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.92■□□□□ 0.62
Sp140Q6NSQ5 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.92■□□□□ 0.62
Sp140Q6NSQ5 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.92■□□□□ 0.62
Sp140Q6NSQ5 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sp140Q6NSQ5 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sp140Q6NSQ5 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sp140Q6NSQ5 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sp140Q6NSQ5 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Sp140Q6NSQ5 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sp140Q6NSQ5 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Sp140Q6NSQ5 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sp140Q6NSQ5 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sp140Q6NSQ5 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Sp140Q6NSQ5 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sp140Q6NSQ5 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sp140Q6NSQ5 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sp140Q6NSQ5 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Sp140Q6NSQ5 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.9■□□□□ 0.62
Sp140Q6NSQ5 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sp140Q6NSQ5 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Sp140Q6NSQ5 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sp140Q6NSQ5 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sp140Q6NSQ5 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Sp140Q6NSQ5 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.89■□□□□ 0.62
Sp140Q6NSQ5 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Sp140Q6NSQ5 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Sp140Q6NSQ5 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Sp140Q6NSQ5 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Sp140Q6NSQ5 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sp140Q6NSQ5 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sp140Q6NSQ5 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.89■□□□□ 0.61
Sp140Q6NSQ5 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sp140Q6NSQ5 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.89■□□□□ 0.61
Sp140Q6NSQ5 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sp140Q6NSQ5 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Sp140Q6NSQ5 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Sp140Q6NSQ5 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sp140Q6NSQ5 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sp140Q6NSQ5 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
Sp140Q6NSQ5 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sp140Q6NSQ5 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.89■□□□□ 0.61
Sp140Q6NSQ5 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sp140Q6NSQ5 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sp140Q6NSQ5 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sp140Q6NSQ5 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Sp140Q6NSQ5 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sp140Q6NSQ5 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.88■□□□□ 0.61
Sp140Q6NSQ5 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.88■□□□□ 0.61
Sp140Q6NSQ5 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sp140Q6NSQ5 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.88■□□□□ 0.61
Sp140Q6NSQ5 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms