Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.63■□□□□ 0.89
Krt39Q6IFX4 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Krt39Q6IFX4 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Krt39Q6IFX4 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Krt39Q6IFX4 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Krt39Q6IFX4 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Krt39Q6IFX4 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Krt39Q6IFX4 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Krt39Q6IFX4 Gm11421-201ENSMUST00000122124 294 ntBASIC20.62■□□□□ 0.89
Krt39Q6IFX4 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Krt39Q6IFX4 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Krt39Q6IFX4 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Krt39Q6IFX4 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Krt39Q6IFX4 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Krt39Q6IFX4 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Krt39Q6IFX4 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Krt39Q6IFX4 Gm43213-201ENSMUST00000151866 1790 ntBASIC20.62■□□□□ 0.89
Krt39Q6IFX4 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.62■□□□□ 0.89
Krt39Q6IFX4 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Krt39Q6IFX4 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Krt39Q6IFX4 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Krt39Q6IFX4 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Krt39Q6IFX4 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Krt39Q6IFX4 Gm15039-201ENSMUST00000118914 875 ntBASIC20.61■□□□□ 0.89
Krt39Q6IFX4 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.61■□□□□ 0.89
Krt39Q6IFX4 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Krt39Q6IFX4 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Krt39Q6IFX4 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Krt39Q6IFX4 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Krt39Q6IFX4 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Krt39Q6IFX4 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Krt39Q6IFX4 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Krt39Q6IFX4 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Krt39Q6IFX4 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Krt39Q6IFX4 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Krt39Q6IFX4 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Krt39Q6IFX4 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Krt39Q6IFX4 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Krt39Q6IFX4 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Krt39Q6IFX4 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Krt39Q6IFX4 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC20.59■□□□□ 0.89
Krt39Q6IFX4 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Krt39Q6IFX4 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Krt39Q6IFX4 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Krt39Q6IFX4 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Krt39Q6IFX4 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Krt39Q6IFX4 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Krt39Q6IFX4 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Krt39Q6IFX4 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Krt39Q6IFX4 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Krt39Q6IFX4 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.59■□□□□ 0.89
Krt39Q6IFX4 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Krt39Q6IFX4 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Krt39Q6IFX4 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Krt39Q6IFX4 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Krt39Q6IFX4 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Krt39Q6IFX4 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Krt39Q6IFX4 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Krt39Q6IFX4 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.58■□□□□ 0.89
Krt39Q6IFX4 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Krt39Q6IFX4 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Krt39Q6IFX4 Gm43173-201ENSMUST00000202246 593 ntBASIC20.58■□□□□ 0.89
Krt39Q6IFX4 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Krt39Q6IFX4 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Krt39Q6IFX4 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Krt39Q6IFX4 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Krt39Q6IFX4 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Krt39Q6IFX4 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Krt39Q6IFX4 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Krt39Q6IFX4 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Krt39Q6IFX4 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Krt39Q6IFX4 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Krt39Q6IFX4 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC20.57■□□□□ 0.88
Krt39Q6IFX4 Gm8493-201ENSMUST00000196881 489 ntBASIC20.57■□□□□ 0.88
Krt39Q6IFX4 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Krt39Q6IFX4 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Krt39Q6IFX4 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.57■□□□□ 0.88
Krt39Q6IFX4 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Krt39Q6IFX4 Gm6139-201ENSMUST00000079261 882 ntBASIC20.57■□□□□ 0.88
Krt39Q6IFX4 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Krt39Q6IFX4 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Krt39Q6IFX4 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Krt39Q6IFX4 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Krt39Q6IFX4 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Krt39Q6IFX4 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Krt39Q6IFX4 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Krt39Q6IFX4 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Krt39Q6IFX4 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Krt39Q6IFX4 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.56■□□□□ 0.88
Krt39Q6IFX4 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Krt39Q6IFX4 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.56■□□□□ 0.88
Krt39Q6IFX4 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.56■□□□□ 0.88
Krt39Q6IFX4 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.56■□□□□ 0.88
Krt39Q6IFX4 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.56■□□□□ 0.88
Krt39Q6IFX4 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Krt39Q6IFX4 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Krt39Q6IFX4 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Krt39Q6IFX4 Gm27801-201ENSMUST00000184174 223 ntBASIC20.55■□□□□ 0.88
Krt39Q6IFX4 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Krt39Q6IFX4 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms