Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Scn9aQ62205 Arhgef4-208ENSMUST00000211073 171 ntBASIC22.29■■□□□ 1.16
Scn9aQ62205 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Scn9aQ62205 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Scn9aQ62205 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Scn9aQ62205 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Scn9aQ62205 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Scn9aQ62205 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Scn9aQ62205 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Scn9aQ62205 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
Scn9aQ62205 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC22.28■■□□□ 1.16
Scn9aQ62205 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Scn9aQ62205 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Scn9aQ62205 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Scn9aQ62205 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Scn9aQ62205 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Scn9aQ62205 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Scn9aQ62205 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Scn9aQ62205 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Scn9aQ62205 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC22.27■■□□□ 1.16
Scn9aQ62205 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Scn9aQ62205 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Scn9aQ62205 Gm5540-201ENSMUST00000131852 1848 ntBASIC22.27■■□□□ 1.16
Scn9aQ62205 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Scn9aQ62205 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Scn9aQ62205 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Scn9aQ62205 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC22.27■■□□□ 1.15
Scn9aQ62205 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Scn9aQ62205 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Scn9aQ62205 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
Scn9aQ62205 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Scn9aQ62205 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Scn9aQ62205 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Scn9aQ62205 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
Scn9aQ62205 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Scn9aQ62205 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Scn9aQ62205 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Scn9aQ62205 Hsf1-207ENSMUST00000228371 2102 ntBASIC22.26■■□□□ 1.15
Scn9aQ62205 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC22.25■■□□□ 1.15
Scn9aQ62205 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC22.25■■□□□ 1.15
Scn9aQ62205 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Scn9aQ62205 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Scn9aQ62205 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Scn9aQ62205 Gm13559-201ENSMUST00000120476 863 ntBASIC22.25■■□□□ 1.15
Scn9aQ62205 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
Scn9aQ62205 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Scn9aQ62205 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
Scn9aQ62205 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Scn9aQ62205 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Scn9aQ62205 Gm7889-201ENSMUST00000185591 958 ntBASIC22.24■■□□□ 1.15
Scn9aQ62205 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC22.24■■□□□ 1.15
Scn9aQ62205 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Scn9aQ62205 Gm30025-201ENSMUST00000218555 728 ntBASIC22.24■■□□□ 1.15
Scn9aQ62205 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Scn9aQ62205 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC22.24■■□□□ 1.15
Scn9aQ62205 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Scn9aQ62205 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Scn9aQ62205 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC22.24■■□□□ 1.15
Scn9aQ62205 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC22.23■■□□□ 1.15
Scn9aQ62205 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Scn9aQ62205 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Scn9aQ62205 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Scn9aQ62205 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Scn9aQ62205 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Scn9aQ62205 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Scn9aQ62205 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC22.23■■□□□ 1.15
Scn9aQ62205 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Scn9aQ62205 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Scn9aQ62205 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC22.22■■□□□ 1.15
Scn9aQ62205 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC22.22■■□□□ 1.15
Scn9aQ62205 Gm11539-201ENSMUST00000119837 557 ntBASIC22.22■■□□□ 1.15
Scn9aQ62205 Gm13436-201ENSMUST00000120418 567 ntBASIC22.22■■□□□ 1.15
Scn9aQ62205 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Scn9aQ62205 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Scn9aQ62205 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Scn9aQ62205 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Scn9aQ62205 Gm27741-201ENSMUST00000185060 237 ntBASIC22.21■■□□□ 1.15
Scn9aQ62205 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Scn9aQ62205 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Scn9aQ62205 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Scn9aQ62205 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Scn9aQ62205 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC22.21■■□□□ 1.15
Scn9aQ62205 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Scn9aQ62205 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Scn9aQ62205 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC22.2■■□□□ 1.14
Scn9aQ62205 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC22.2■■□□□ 1.14
Scn9aQ62205 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC22.2■■□□□ 1.14
Scn9aQ62205 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Scn9aQ62205 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC22.2■■□□□ 1.14
Scn9aQ62205 Gm38160-201ENSMUST00000193090 2499 ntBASIC22.2■■□□□ 1.14
Scn9aQ62205 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Scn9aQ62205 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Scn9aQ62205 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Scn9aQ62205 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Scn9aQ62205 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Scn9aQ62205 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Scn9aQ62205 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Scn9aQ62205 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Scn9aQ62205 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Scn9aQ62205 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms