Protein–RNA interactions for Protein: Q62191

Trim21, E3 ubiquitin-protein ligase TRIM21, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim21Q62191 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim21Q62191 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim21Q62191 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim21Q62191 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Trim21Q62191 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim21Q62191 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim21Q62191 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim21Q62191 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Trim21Q62191 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim21Q62191 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim21Q62191 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim21Q62191 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim21Q62191 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.66■□□□□ 0.74
Trim21Q62191 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Trim21Q62191 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim21Q62191 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Trim21Q62191 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.66■□□□□ 0.74
Trim21Q62191 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Trim21Q62191 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim21Q62191 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Trim21Q62191 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.65■□□□□ 0.74
Trim21Q62191 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim21Q62191 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim21Q62191 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim21Q62191 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim21Q62191 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim21Q62191 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim21Q62191 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim21Q62191 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim21Q62191 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.65■□□□□ 0.74
Trim21Q62191 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trim21Q62191 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trim21Q62191 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim21Q62191 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim21Q62191 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim21Q62191 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.64■□□□□ 0.73
Trim21Q62191 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim21Q62191 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim21Q62191 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Trim21Q62191 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim21Q62191 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim21Q62191 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim21Q62191 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim21Q62191 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim21Q62191 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Trim21Q62191 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim21Q62191 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim21Q62191 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim21Q62191 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim21Q62191 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim21Q62191 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
Trim21Q62191 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim21Q62191 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim21Q62191 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim21Q62191 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim21Q62191 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim21Q62191 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Trim21Q62191 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim21Q62191 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim21Q62191 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim21Q62191 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trim21Q62191 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trim21Q62191 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim21Q62191 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim21Q62191 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Trim21Q62191 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim21Q62191 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim21Q62191 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim21Q62191 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim21Q62191 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trim21Q62191 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.61■□□□□ 0.73
Trim21Q62191 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim21Q62191 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim21Q62191 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim21Q62191 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.61■□□□□ 0.73
Trim21Q62191 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim21Q62191 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.61■□□□□ 0.73
Trim21Q62191 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.61■□□□□ 0.73
Trim21Q62191 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim21Q62191 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim21Q62191 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Trim21Q62191 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.61■□□□□ 0.73
Trim21Q62191 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim21Q62191 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim21Q62191 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim21Q62191 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim21Q62191 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
Trim21Q62191 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Trim21Q62191 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim21Q62191 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim21Q62191 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim21Q62191 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
Trim21Q62191 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim21Q62191 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim21Q62191 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim21Q62191 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Trim21Q62191 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim21Q62191 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim21Q62191 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.6■□□□□ 0.73
Trim21Q62191 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms