Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Foxc1Q61572 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Foxc1Q61572 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Foxc1Q61572 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC13.62□□□□□ -0.23
Foxc1Q61572 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC13.62□□□□□ -0.23
Foxc1Q61572 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC13.62□□□□□ -0.23
Foxc1Q61572 AC154532.1-201ENSMUST00000227860 965 ntBASIC13.62□□□□□ -0.23
Foxc1Q61572 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Foxc1Q61572 Gm10602-201ENSMUST00000098239 609 ntBASIC13.62□□□□□ -0.23
Foxc1Q61572 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Foxc1Q61572 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Foxc1Q61572 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxc1Q61572 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Foxc1Q61572 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxc1Q61572 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxc1Q61572 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Foxc1Q61572 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxc1Q61572 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
Foxc1Q61572 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxc1Q61572 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Foxc1Q61572 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxc1Q61572 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxc1Q61572 Gm13234-201ENSMUST00000120010 747 ntBASIC13.61□□□□□ -0.23
Foxc1Q61572 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Foxc1Q61572 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxc1Q61572 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Foxc1Q61572 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxc1Q61572 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Foxc1Q61572 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC13.61□□□□□ -0.23
Foxc1Q61572 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Foxc1Q61572 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC13.61□□□□□ -0.23
Foxc1Q61572 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Foxc1Q61572 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC13.61□□□□□ -0.23
Foxc1Q61572 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Foxc1Q61572 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC13.61□□□□□ -0.23
Foxc1Q61572 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxc1Q61572 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxc1Q61572 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Foxc1Q61572 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Foxc1Q61572 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxc1Q61572 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxc1Q61572 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Foxc1Q61572 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Foxc1Q61572 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Foxc1Q61572 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxc1Q61572 Gm11434-201ENSMUST00000122379 629 ntBASIC13.6□□□□□ -0.23
Foxc1Q61572 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Foxc1Q61572 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Foxc1Q61572 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC13.6□□□□□ -0.23
Foxc1Q61572 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC13.6□□□□□ -0.23
Foxc1Q61572 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC13.6□□□□□ -0.23
Foxc1Q61572 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Foxc1Q61572 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC13.6□□□□□ -0.23
Foxc1Q61572 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Foxc1Q61572 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxc1Q61572 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxc1Q61572 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxc1Q61572 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Foxc1Q61572 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Foxc1Q61572 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Foxc1Q61572 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Foxc1Q61572 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Foxc1Q61572 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Foxc1Q61572 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Foxc1Q61572 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Foxc1Q61572 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
Foxc1Q61572 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Foxc1Q61572 Reep4-203ENSMUST00000226563 1444 ntBASIC13.59□□□□□ -0.23
Foxc1Q61572 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Foxc1Q61572 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Foxc1Q61572 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC13.59□□□□□ -0.23
Foxc1Q61572 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Foxc1Q61572 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC13.59□□□□□ -0.23
Foxc1Q61572 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC13.59□□□□□ -0.23
Foxc1Q61572 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Foxc1Q61572 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Foxc1Q61572 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Foxc1Q61572 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Foxc1Q61572 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Foxc1Q61572 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Foxc1Q61572 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Foxc1Q61572 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Foxc1Q61572 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Foxc1Q61572 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
Foxc1Q61572 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Foxc1Q61572 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Foxc1Q61572 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Foxc1Q61572 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Foxc1Q61572 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Foxc1Q61572 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Foxc1Q61572 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC13.58□□□□□ -0.24
Foxc1Q61572 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Foxc1Q61572 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Foxc1Q61572 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC13.58□□□□□ -0.24
Foxc1Q61572 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC13.58□□□□□ -0.24
Foxc1Q61572 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Foxc1Q61572 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Foxc1Q61572 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Foxc1Q61572 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Foxc1Q61572 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms