Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Gm26524-201ENSMUST00000192339 390 ntBASIC19.49■□□□□ 0.71
Smarcd1Q61466 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.49■□□□□ 0.71
Smarcd1Q61466 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.49■□□□□ 0.71
Smarcd1Q61466 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcd1Q61466 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcd1Q61466 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcd1Q61466 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcd1Q61466 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.48■□□□□ 0.71
Smarcd1Q61466 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcd1Q61466 Gm12441-201ENSMUST00000121806 588 ntBASIC19.48■□□□□ 0.71
Smarcd1Q61466 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Smarcd1Q61466 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Smarcd1Q61466 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcd1Q61466 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcd1Q61466 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcd1Q61466 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcd1Q61466 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcd1Q61466 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.47■□□□□ 0.71
Smarcd1Q61466 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcd1Q61466 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcd1Q61466 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcd1Q61466 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcd1Q61466 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcd1Q61466 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcd1Q61466 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.46■□□□□ 0.71
Smarcd1Q61466 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.46■□□□□ 0.71
Smarcd1Q61466 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcd1Q61466 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Smarcd1Q61466 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.46■□□□□ 0.71
Smarcd1Q61466 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.46■□□□□ 0.71
Smarcd1Q61466 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcd1Q61466 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Smarcd1Q61466 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcd1Q61466 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.46■□□□□ 0.71
Smarcd1Q61466 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.46■□□□□ 0.71
Smarcd1Q61466 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcd1Q61466 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcd1Q61466 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcd1Q61466 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcd1Q61466 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcd1Q61466 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Smarcd1Q61466 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.45■□□□□ 0.7
Smarcd1Q61466 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcd1Q61466 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.45■□□□□ 0.7
Smarcd1Q61466 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Smarcd1Q61466 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcd1Q61466 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Smarcd1Q61466 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcd1Q61466 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcd1Q61466 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcd1Q61466 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcd1Q61466 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.44■□□□□ 0.7
Smarcd1Q61466 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcd1Q61466 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcd1Q61466 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.44■□□□□ 0.7
Smarcd1Q61466 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcd1Q61466 Rab3c-203ENSMUST00000224180 967 ntBASIC19.44■□□□□ 0.7
Smarcd1Q61466 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcd1Q61466 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.44■□□□□ 0.7
Smarcd1Q61466 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Smarcd1Q61466 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcd1Q61466 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcd1Q61466 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcd1Q61466 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcd1Q61466 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcd1Q61466 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smarcd1Q61466 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcd1Q61466 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcd1Q61466 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcd1Q61466 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcd1Q61466 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcd1Q61466 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcd1Q61466 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.43■□□□□ 0.7
Smarcd1Q61466 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcd1Q61466 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.43■□□□□ 0.7
Smarcd1Q61466 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.43■□□□□ 0.7
Smarcd1Q61466 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcd1Q61466 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.43■□□□□ 0.7
Smarcd1Q61466 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcd1Q61466 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcd1Q61466 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.43■□□□□ 0.7
Smarcd1Q61466 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcd1Q61466 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcd1Q61466 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcd1Q61466 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcd1Q61466 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcd1Q61466 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcd1Q61466 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smarcd1Q61466 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcd1Q61466 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcd1Q61466 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcd1Q61466 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcd1Q61466 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcd1Q61466 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.42■□□□□ 0.7
Smarcd1Q61466 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcd1Q61466 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcd1Q61466 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.42■□□□□ 0.7
Smarcd1Q61466 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcd1Q61466 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smarcd1Q61466 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms