Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Six4Q61321 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Six4Q61321 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Six4Q61321 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Six4Q61321 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.91■□□□□ 0.62
Six4Q61321 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Six4Q61321 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.91■□□□□ 0.62
Six4Q61321 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Six4Q61321 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Six4Q61321 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Six4Q61321 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Six4Q61321 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Six4Q61321 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Six4Q61321 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Six4Q61321 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Six4Q61321 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Six4Q61321 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Six4Q61321 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Six4Q61321 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Six4Q61321 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Six4Q61321 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Six4Q61321 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Six4Q61321 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Six4Q61321 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.89■□□□□ 0.61
Six4Q61321 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Six4Q61321 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Six4Q61321 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.89■□□□□ 0.61
Six4Q61321 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Six4Q61321 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Six4Q61321 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Six4Q61321 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Six4Q61321 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Six4Q61321 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Six4Q61321 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Six4Q61321 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Six4Q61321 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.88■□□□□ 0.61
Six4Q61321 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Six4Q61321 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Six4Q61321 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Six4Q61321 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Six4Q61321 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Six4Q61321 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.88■□□□□ 0.61
Six4Q61321 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.88■□□□□ 0.61
Six4Q61321 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Six4Q61321 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Six4Q61321 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.88■□□□□ 0.61
Six4Q61321 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Six4Q61321 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Six4Q61321 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Six4Q61321 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Six4Q61321 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Six4Q61321 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Six4Q61321 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Six4Q61321 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Six4Q61321 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Six4Q61321 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.87■□□□□ 0.61
Six4Q61321 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Six4Q61321 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Six4Q61321 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Six4Q61321 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Six4Q61321 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Six4Q61321 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Six4Q61321 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Six4Q61321 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Six4Q61321 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.86■□□□□ 0.61
Six4Q61321 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.86■□□□□ 0.61
Six4Q61321 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Six4Q61321 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Six4Q61321 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Six4Q61321 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Six4Q61321 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Six4Q61321 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Six4Q61321 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Six4Q61321 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Six4Q61321 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Six4Q61321 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Six4Q61321 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Six4Q61321 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.85■□□□□ 0.61
Six4Q61321 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Six4Q61321 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Six4Q61321 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Six4Q61321 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Six4Q61321 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Six4Q61321 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Six4Q61321 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Six4Q61321 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Six4Q61321 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Six4Q61321 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Six4Q61321 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Six4Q61321 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Six4Q61321 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Six4Q61321 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Six4Q61321 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Six4Q61321 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Six4Q61321 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Six4Q61321 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Six4Q61321 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Six4Q61321 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Six4Q61321 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Six4Q61321 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms