Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC27.31■■□□□ 1.96
Ptch1Q61115 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
Ptch1Q61115 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC27.3■■□□□ 1.96
Ptch1Q61115 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC27.3■■□□□ 1.96
Ptch1Q61115 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Ptch1Q61115 Gm15375-201ENSMUST00000119510 849 ntBASIC27.3■■□□□ 1.96
Ptch1Q61115 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Ptch1Q61115 Gm10138-203ENSMUST00000206952 366 ntBASIC27.3■■□□□ 1.96
Ptch1Q61115 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Ptch1Q61115 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Ptch1Q61115 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC27.29■■□□□ 1.96
Ptch1Q61115 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Ptch1Q61115 Gm18032-201ENSMUST00000222541 538 ntBASIC27.29■■□□□ 1.96
Ptch1Q61115 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Ptch1Q61115 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Ptch1Q61115 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Ptch1Q61115 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Ptch1Q61115 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Ptch1Q61115 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Ptch1Q61115 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Ptch1Q61115 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC27.28■■□□□ 1.96
Ptch1Q61115 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
Ptch1Q61115 Gm33142-201ENSMUST00000193913 867 ntBASIC27.28■■□□□ 1.96
Ptch1Q61115 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC27.28■■□□□ 1.96
Ptch1Q61115 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Ptch1Q61115 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Ptch1Q61115 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
Ptch1Q61115 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC27.28■■□□□ 1.96
Ptch1Q61115 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Ptch1Q61115 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
Ptch1Q61115 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Ptch1Q61115 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Ptch1Q61115 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Ptch1Q61115 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
Ptch1Q61115 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Ptch1Q61115 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
Ptch1Q61115 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Ptch1Q61115 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Ptch1Q61115 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
Ptch1Q61115 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
Ptch1Q61115 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Ptch1Q61115 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Ptch1Q61115 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Ptch1Q61115 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC27.25■■□□□ 1.95
Ptch1Q61115 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Ptch1Q61115 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Ptch1Q61115 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Ptch1Q61115 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Ptch1Q61115 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Ptch1Q61115 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Ptch1Q61115 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Ptch1Q61115 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC27.24■■□□□ 1.95
Ptch1Q61115 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ptch1Q61115 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ptch1Q61115 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ptch1Q61115 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
Ptch1Q61115 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ptch1Q61115 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
Ptch1Q61115 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ptch1Q61115 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ptch1Q61115 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC27.24■■□□□ 1.95
Ptch1Q61115 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Ptch1Q61115 Dmtn-209ENSMUST00000228295 2572 ntBASIC27.24■■□□□ 1.95
Ptch1Q61115 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC27.24■■□□□ 1.95
Ptch1Q61115 Gm10013-201ENSMUST00000106074 672 ntBASIC27.24■■□□□ 1.95
Ptch1Q61115 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Ptch1Q61115 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Ptch1Q61115 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
Ptch1Q61115 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Ptch1Q61115 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Ptch1Q61115 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Ptch1Q61115 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Ptch1Q61115 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Ptch1Q61115 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
Ptch1Q61115 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC27.21■■□□□ 1.95
Ptch1Q61115 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Ptch1Q61115 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC27.21■■□□□ 1.95
Ptch1Q61115 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Ptch1Q61115 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
Ptch1Q61115 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC27.21■■□□□ 1.95
Ptch1Q61115 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC27.2■■□□□ 1.95
Ptch1Q61115 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Ptch1Q61115 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Ptch1Q61115 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Ptch1Q61115 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC27.19■■□□□ 1.94
Ptch1Q61115 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Ptch1Q61115 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC27.19■■□□□ 1.94
Ptch1Q61115 Gm14464-201ENSMUST00000119658 1254 ntBASIC27.19■■□□□ 1.94
Ptch1Q61115 AA414768-201ENSMUST00000121924 1257 ntBASIC27.19■■□□□ 1.94
Ptch1Q61115 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC27.19■■□□□ 1.94
Ptch1Q61115 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Ptch1Q61115 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC27.19■■□□□ 1.94
Ptch1Q61115 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
Ptch1Q61115 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Ptch1Q61115 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
Ptch1Q61115 Gm18959-201ENSMUST00000208954 655 ntBASIC27.18■■□□□ 1.94
Ptch1Q61115 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
Ptch1Q61115 Gm5540-201ENSMUST00000131852 1848 ntBASIC27.18■■□□□ 1.94
Ptch1Q61115 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Ptch1Q61115 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms