Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ripk1Q60855 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ripk1Q60855 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ripk1Q60855 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.58■□□□□ 0.4
Ripk1Q60855 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Ripk1Q60855 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.58■□□□□ 0.4
Ripk1Q60855 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ripk1Q60855 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.58■□□□□ 0.4
Ripk1Q60855 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ripk1Q60855 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ripk1Q60855 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ripk1Q60855 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ripk1Q60855 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ripk1Q60855 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ripk1Q60855 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Ripk1Q60855 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ripk1Q60855 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ripk1Q60855 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ripk1Q60855 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ripk1Q60855 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ripk1Q60855 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.57■□□□□ 0.4
Ripk1Q60855 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.57■□□□□ 0.4
Ripk1Q60855 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Ripk1Q60855 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.57■□□□□ 0.4
Ripk1Q60855 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ripk1Q60855 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ripk1Q60855 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ripk1Q60855 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ripk1Q60855 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ripk1Q60855 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.56■□□□□ 0.4
Ripk1Q60855 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.56■□□□□ 0.4
Ripk1Q60855 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ripk1Q60855 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
Ripk1Q60855 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Ripk1Q60855 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ripk1Q60855 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ripk1Q60855 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.56■□□□□ 0.4
Ripk1Q60855 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ripk1Q60855 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Ripk1Q60855 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ripk1Q60855 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ripk1Q60855 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ripk1Q60855 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ripk1Q60855 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ripk1Q60855 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ripk1Q60855 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ripk1Q60855 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ripk1Q60855 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ripk1Q60855 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Ripk1Q60855 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ripk1Q60855 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ripk1Q60855 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ripk1Q60855 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ripk1Q60855 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.55■□□□□ 0.4
Ripk1Q60855 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Ripk1Q60855 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ripk1Q60855 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ripk1Q60855 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Ripk1Q60855 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Ripk1Q60855 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ripk1Q60855 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ripk1Q60855 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ripk1Q60855 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Ripk1Q60855 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ripk1Q60855 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ripk1Q60855 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ripk1Q60855 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ripk1Q60855 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.54■□□□□ 0.4
Ripk1Q60855 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.54■□□□□ 0.4
Ripk1Q60855 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ripk1Q60855 Gm9988-201ENSMUST00000069786 435 ntBASIC17.54■□□□□ 0.4
Ripk1Q60855 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ripk1Q60855 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.54■□□□□ 0.4
Ripk1Q60855 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Ripk1Q60855 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Ripk1Q60855 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.54■□□□□ 0.4
Ripk1Q60855 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ripk1Q60855 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ripk1Q60855 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ripk1Q60855 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ripk1Q60855 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.53■□□□□ 0.4
Ripk1Q60855 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ripk1Q60855 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ripk1Q60855 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ripk1Q60855 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ripk1Q60855 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ripk1Q60855 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC17.53■□□□□ 0.4
Ripk1Q60855 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ripk1Q60855 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ripk1Q60855 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ripk1Q60855 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ripk1Q60855 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ripk1Q60855 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ripk1Q60855 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ripk1Q60855 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ripk1Q60855 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ripk1Q60855 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Ripk1Q60855 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ripk1Q60855 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Ripk1Q60855 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms