Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Xrcc1Q60596 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Xrcc1Q60596 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Xrcc1Q60596 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.83■□□□□ 0.45
Xrcc1Q60596 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Xrcc1Q60596 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.83■□□□□ 0.44
Xrcc1Q60596 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC17.83■□□□□ 0.44
Xrcc1Q60596 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Xrcc1Q60596 Gm12933-201ENSMUST00000120203 872 ntBASIC17.83■□□□□ 0.44
Xrcc1Q60596 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.83■□□□□ 0.44
Xrcc1Q60596 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Xrcc1Q60596 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.83■□□□□ 0.44
Xrcc1Q60596 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.83■□□□□ 0.44
Xrcc1Q60596 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.83■□□□□ 0.44
Xrcc1Q60596 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Xrcc1Q60596 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Xrcc1Q60596 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
Xrcc1Q60596 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Xrcc1Q60596 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Xrcc1Q60596 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Xrcc1Q60596 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Xrcc1Q60596 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Xrcc1Q60596 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Xrcc1Q60596 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.82■□□□□ 0.44
Xrcc1Q60596 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Xrcc1Q60596 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Xrcc1Q60596 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.82■□□□□ 0.44
Xrcc1Q60596 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Xrcc1Q60596 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Xrcc1Q60596 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Xrcc1Q60596 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Xrcc1Q60596 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Xrcc1Q60596 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.81■□□□□ 0.44
Xrcc1Q60596 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Xrcc1Q60596 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Xrcc1Q60596 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Xrcc1Q60596 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Xrcc1Q60596 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.81■□□□□ 0.44
Xrcc1Q60596 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.81■□□□□ 0.44
Xrcc1Q60596 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Xrcc1Q60596 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Xrcc1Q60596 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Xrcc1Q60596 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Xrcc1Q60596 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Xrcc1Q60596 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Xrcc1Q60596 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Xrcc1Q60596 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.8■□□□□ 0.44
Xrcc1Q60596 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Xrcc1Q60596 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Xrcc1Q60596 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Xrcc1Q60596 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Xrcc1Q60596 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Xrcc1Q60596 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Xrcc1Q60596 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Xrcc1Q60596 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.8■□□□□ 0.44
Xrcc1Q60596 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Xrcc1Q60596 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Xrcc1Q60596 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Xrcc1Q60596 Gm7290-201ENSMUST00000104990 617 ntBASIC17.79■□□□□ 0.44
Xrcc1Q60596 Gm12918-201ENSMUST00000120234 636 ntBASIC17.79■□□□□ 0.44
Xrcc1Q60596 Gm15710-201ENSMUST00000121821 636 ntBASIC17.79■□□□□ 0.44
Xrcc1Q60596 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.79■□□□□ 0.44
Xrcc1Q60596 Gm5075-201ENSMUST00000196916 622 ntBASIC17.79■□□□□ 0.44
Xrcc1Q60596 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.79■□□□□ 0.44
Xrcc1Q60596 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.79■□□□□ 0.44
Xrcc1Q60596 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Xrcc1Q60596 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Xrcc1Q60596 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Xrcc1Q60596 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Xrcc1Q60596 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.78■□□□□ 0.44
Xrcc1Q60596 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Xrcc1Q60596 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Xrcc1Q60596 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Xrcc1Q60596 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Xrcc1Q60596 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Xrcc1Q60596 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
Xrcc1Q60596 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Xrcc1Q60596 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.78■□□□□ 0.44
Xrcc1Q60596 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.78■□□□□ 0.44
Xrcc1Q60596 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Xrcc1Q60596 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Xrcc1Q60596 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Xrcc1Q60596 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Xrcc1Q60596 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Xrcc1Q60596 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Xrcc1Q60596 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Xrcc1Q60596 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Xrcc1Q60596 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.77■□□□□ 0.44
Xrcc1Q60596 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Xrcc1Q60596 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Xrcc1Q60596 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Xrcc1Q60596 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Xrcc1Q60596 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Xrcc1Q60596 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Xrcc1Q60596 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Xrcc1Q60596 Gm10602-201ENSMUST00000098239 609 ntBASIC17.77■□□□□ 0.44
Xrcc1Q60596 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Xrcc1Q60596 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Xrcc1Q60596 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
Xrcc1Q60596 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms