Protein–RNA interactions for Protein: Q5XFR0

Pabpn1l, Embryonic polyadenylate-binding protein 2, mousemouse

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1lQ5XFR0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pabpn1lQ5XFR0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pabpn1lQ5XFR0 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Pabpn1lQ5XFR0 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pabpn1lQ5XFR0 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pabpn1lQ5XFR0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pabpn1lQ5XFR0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC18.69■□□□□ 0.58
Pabpn1lQ5XFR0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pabpn1lQ5XFR0 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pabpn1lQ5XFR0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pabpn1lQ5XFR0 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pabpn1lQ5XFR0 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Pabpn1lQ5XFR0 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pabpn1lQ5XFR0 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pabpn1lQ5XFR0 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pabpn1lQ5XFR0 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.69■□□□□ 0.58
Pabpn1lQ5XFR0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pabpn1lQ5XFR0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pabpn1lQ5XFR0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pabpn1lQ5XFR0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.69■□□□□ 0.58
Pabpn1lQ5XFR0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pabpn1lQ5XFR0 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
Pabpn1lQ5XFR0 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pabpn1lQ5XFR0 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pabpn1lQ5XFR0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pabpn1lQ5XFR0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.68■□□□□ 0.58
Pabpn1lQ5XFR0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pabpn1lQ5XFR0 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.68■□□□□ 0.58
Pabpn1lQ5XFR0 Etf1-202ENSMUST00000180351 108 ntBASIC18.68■□□□□ 0.58
Pabpn1lQ5XFR0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Pabpn1lQ5XFR0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pabpn1lQ5XFR0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Pabpn1lQ5XFR0 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pabpn1lQ5XFR0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pabpn1lQ5XFR0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pabpn1lQ5XFR0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pabpn1lQ5XFR0 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pabpn1lQ5XFR0 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Pabpn1lQ5XFR0 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Pabpn1lQ5XFR0 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pabpn1lQ5XFR0 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pabpn1lQ5XFR0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pabpn1lQ5XFR0 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Pabpn1lQ5XFR0 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pabpn1lQ5XFR0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.67■□□□□ 0.58
Pabpn1lQ5XFR0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pabpn1lQ5XFR0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pabpn1lQ5XFR0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pabpn1lQ5XFR0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pabpn1lQ5XFR0 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pabpn1lQ5XFR0 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pabpn1lQ5XFR0 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.66■□□□□ 0.58
Pabpn1lQ5XFR0 Gm10399-202ENSMUST00000202768 748 ntBASIC18.66■□□□□ 0.58
Pabpn1lQ5XFR0 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.66■□□□□ 0.58
Pabpn1lQ5XFR0 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pabpn1lQ5XFR0 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pabpn1lQ5XFR0 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Pabpn1lQ5XFR0 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pabpn1lQ5XFR0 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
Pabpn1lQ5XFR0 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pabpn1lQ5XFR0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pabpn1lQ5XFR0 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pabpn1lQ5XFR0 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Pabpn1lQ5XFR0 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.65■□□□□ 0.58
Pabpn1lQ5XFR0 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pabpn1lQ5XFR0 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pabpn1lQ5XFR0 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pabpn1lQ5XFR0 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.65■□□□□ 0.58
Pabpn1lQ5XFR0 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pabpn1lQ5XFR0 Gm15039-201ENSMUST00000118914 875 ntBASIC18.65■□□□□ 0.58
Pabpn1lQ5XFR0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pabpn1lQ5XFR0 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pabpn1lQ5XFR0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Pabpn1lQ5XFR0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Pabpn1lQ5XFR0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pabpn1lQ5XFR0 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pabpn1lQ5XFR0 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Pabpn1lQ5XFR0 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pabpn1lQ5XFR0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pabpn1lQ5XFR0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pabpn1lQ5XFR0 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.64■□□□□ 0.58
Pabpn1lQ5XFR0 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pabpn1lQ5XFR0 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pabpn1lQ5XFR0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pabpn1lQ5XFR0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pabpn1lQ5XFR0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pabpn1lQ5XFR0 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pabpn1lQ5XFR0 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pabpn1lQ5XFR0 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pabpn1lQ5XFR0 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pabpn1lQ5XFR0 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pabpn1lQ5XFR0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pabpn1lQ5XFR0 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.63■□□□□ 0.57
Pabpn1lQ5XFR0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Pabpn1lQ5XFR0 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.63■□□□□ 0.57
Pabpn1lQ5XFR0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pabpn1lQ5XFR0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.63■□□□□ 0.57
Pabpn1lQ5XFR0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pabpn1lQ5XFR0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pabpn1lQ5XFR0 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms