Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC17.17■□□□□ 0.34
Urb1Q571H0 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Urb1Q571H0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Urb1Q571H0 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Urb1Q571H0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Urb1Q571H0 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Urb1Q571H0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Urb1Q571H0 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Urb1Q571H0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Urb1Q571H0 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.16■□□□□ 0.34
Urb1Q571H0 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.16■□□□□ 0.34
Urb1Q571H0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Urb1Q571H0 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Urb1Q571H0 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Urb1Q571H0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Urb1Q571H0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Urb1Q571H0 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Urb1Q571H0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.15■□□□□ 0.34
Urb1Q571H0 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Urb1Q571H0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Urb1Q571H0 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Urb1Q571H0 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Urb1Q571H0 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Urb1Q571H0 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Urb1Q571H0 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.14■□□□□ 0.33
Urb1Q571H0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Urb1Q571H0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Urb1Q571H0 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Urb1Q571H0 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Urb1Q571H0 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Urb1Q571H0 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Urb1Q571H0 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Urb1Q571H0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Urb1Q571H0 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Urb1Q571H0 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Urb1Q571H0 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Urb1Q571H0 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Urb1Q571H0 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.13■□□□□ 0.33
Urb1Q571H0 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Urb1Q571H0 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Urb1Q571H0 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.12■□□□□ 0.33
Urb1Q571H0 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.12■□□□□ 0.33
Urb1Q571H0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Urb1Q571H0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Urb1Q571H0 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Urb1Q571H0 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Urb1Q571H0 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Urb1Q571H0 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.12■□□□□ 0.33
Urb1Q571H0 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.12■□□□□ 0.33
Urb1Q571H0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Urb1Q571H0 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.12■□□□□ 0.33
Urb1Q571H0 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Urb1Q571H0 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Urb1Q571H0 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Urb1Q571H0 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.12■□□□□ 0.33
Urb1Q571H0 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Urb1Q571H0 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC17.12■□□□□ 0.33
Urb1Q571H0 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Urb1Q571H0 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Urb1Q571H0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Urb1Q571H0 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Urb1Q571H0 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Urb1Q571H0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Urb1Q571H0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Urb1Q571H0 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Urb1Q571H0 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC17.11■□□□□ 0.33
Urb1Q571H0 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.11■□□□□ 0.33
Urb1Q571H0 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Urb1Q571H0 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Urb1Q571H0 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Urb1Q571H0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.11■□□□□ 0.33
Urb1Q571H0 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Urb1Q571H0 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Urb1Q571H0 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Urb1Q571H0 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Urb1Q571H0 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Urb1Q571H0 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC17.1■□□□□ 0.33
Urb1Q571H0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Urb1Q571H0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Urb1Q571H0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Urb1Q571H0 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Urb1Q571H0 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.1■□□□□ 0.33
Urb1Q571H0 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Urb1Q571H0 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Urb1Q571H0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.1■□□□□ 0.33
Urb1Q571H0 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC17.1■□□□□ 0.33
Urb1Q571H0 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Urb1Q571H0 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Urb1Q571H0 Gm10231-201ENSMUST00000181584 441 ntBASIC17.1■□□□□ 0.33
Urb1Q571H0 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.1■□□□□ 0.33
Urb1Q571H0 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Urb1Q571H0 Gm10175-202ENSMUST00000208752 441 ntBASIC17.1■□□□□ 0.33
Urb1Q571H0 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Urb1Q571H0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Urb1Q571H0 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Urb1Q571H0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Urb1Q571H0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Urb1Q571H0 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Urb1Q571H0 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Urb1Q571H0 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms