Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Pds5bQ4VA53 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC33.04■■■□□ 2.88
Pds5bQ4VA53 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC33.04■■■□□ 2.88
Pds5bQ4VA53 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC33.04■■■□□ 2.88
Pds5bQ4VA53 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
Pds5bQ4VA53 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC33.04■■■□□ 2.88
Pds5bQ4VA53 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC33.04■■■□□ 2.88
Pds5bQ4VA53 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC33.04■■■□□ 2.88
Pds5bQ4VA53 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
Pds5bQ4VA53 Gm28033-201ENSMUST00000184224 96 ntBASIC33.03■■■□□ 2.88
Pds5bQ4VA53 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC33.03■■■□□ 2.88
Pds5bQ4VA53 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC33.03■■■□□ 2.88
Pds5bQ4VA53 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Pds5bQ4VA53 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Pds5bQ4VA53 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC33.03■■■□□ 2.88
Pds5bQ4VA53 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
Pds5bQ4VA53 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Pds5bQ4VA53 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Pds5bQ4VA53 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Pds5bQ4VA53 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Pds5bQ4VA53 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Pds5bQ4VA53 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
Pds5bQ4VA53 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Pds5bQ4VA53 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC33.02■■■□□ 2.88
Pds5bQ4VA53 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC33.02■■■□□ 2.88
Pds5bQ4VA53 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC33.02■■■□□ 2.88
Pds5bQ4VA53 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC33.01■■■□□ 2.88
Pds5bQ4VA53 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC33.01■■■□□ 2.88
Pds5bQ4VA53 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC33.01■■■□□ 2.88
Pds5bQ4VA53 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
Pds5bQ4VA53 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.88
Pds5bQ4VA53 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
Pds5bQ4VA53 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
Pds5bQ4VA53 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
Pds5bQ4VA53 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC33■■■□□ 2.87
Pds5bQ4VA53 Mir5130-201ENSMUST00000175160 84 ntBASIC33■■■□□ 2.87
Pds5bQ4VA53 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC33■■■□□ 2.87
Pds5bQ4VA53 AC133598.3-202ENSMUST00000224219 531 ntBASIC33■■■□□ 2.87
Pds5bQ4VA53 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
Pds5bQ4VA53 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
Pds5bQ4VA53 Gm37035-201ENSMUST00000194809 2148 ntBASIC32.99■■■□□ 2.87
Pds5bQ4VA53 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
Pds5bQ4VA53 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Pds5bQ4VA53 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC32.99■■■□□ 2.87
Pds5bQ4VA53 Gm27463-201ENSMUST00000183569 57 ntBASIC32.99■■■□□ 2.87
Pds5bQ4VA53 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC32.99■■■□□ 2.87
Pds5bQ4VA53 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Pds5bQ4VA53 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Pds5bQ4VA53 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Pds5bQ4VA53 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC32.98■■■□□ 2.87
Pds5bQ4VA53 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC32.98■■■□□ 2.87
Pds5bQ4VA53 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Pds5bQ4VA53 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
Pds5bQ4VA53 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC32.97■■■□□ 2.87
Pds5bQ4VA53 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
Pds5bQ4VA53 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC32.97■■■□□ 2.87
Pds5bQ4VA53 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC32.97■■■□□ 2.87
Pds5bQ4VA53 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC32.97■■■□□ 2.87
Pds5bQ4VA53 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC32.96■■■□□ 2.87
Pds5bQ4VA53 Gm7153-201ENSMUST00000117092 455 ntBASIC32.96■■■□□ 2.87
Pds5bQ4VA53 Mir6349-201ENSMUST00000184059 97 ntBASIC32.96■■■□□ 2.87
Pds5bQ4VA53 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC32.96■■■□□ 2.87
Pds5bQ4VA53 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC32.95■■■□□ 2.87
Pds5bQ4VA53 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC32.95■■■□□ 2.87
Pds5bQ4VA53 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
Pds5bQ4VA53 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC32.95■■■□□ 2.87
Pds5bQ4VA53 Gm38285-201ENSMUST00000192928 922 ntBASIC32.95■■■□□ 2.87
Pds5bQ4VA53 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
Pds5bQ4VA53 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
Pds5bQ4VA53 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC32.95■■■□□ 2.87
Pds5bQ4VA53 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC32.95■■■□□ 2.87
Pds5bQ4VA53 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC32.95■■■□□ 2.87
Pds5bQ4VA53 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC32.94■■■□□ 2.86
Pds5bQ4VA53 Umpk-ps-201ENSMUST00000211897 827 ntBASIC32.94■■■□□ 2.86
Pds5bQ4VA53 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Pds5bQ4VA53 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC32.94■■■□□ 2.86
Pds5bQ4VA53 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Pds5bQ4VA53 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Pds5bQ4VA53 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Pds5bQ4VA53 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC32.94■■■□□ 2.86
Pds5bQ4VA53 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Pds5bQ4VA53 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Pds5bQ4VA53 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC32.94■■■□□ 2.86
Pds5bQ4VA53 Gm25016-201ENSMUST00000158399 131 ntBASIC32.94■■■□□ 2.86
Pds5bQ4VA53 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Pds5bQ4VA53 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC32.93■■■□□ 2.86
Pds5bQ4VA53 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC32.93■■■□□ 2.86
Pds5bQ4VA53 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
Pds5bQ4VA53 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC32.93■■■□□ 2.86
Pds5bQ4VA53 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC32.93■■■□□ 2.86
Pds5bQ4VA53 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
Pds5bQ4VA53 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC32.93■■■□□ 2.86
Pds5bQ4VA53 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC32.93■■■□□ 2.86
Pds5bQ4VA53 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC32.93■■■□□ 2.86
Pds5bQ4VA53 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC32.93■■■□□ 2.86
Pds5bQ4VA53 AC166341.7-201ENSMUST00000221698 126 ntBASIC32.93■■■□□ 2.86
Pds5bQ4VA53 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
Pds5bQ4VA53 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
Pds5bQ4VA53 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC32.91■■■□□ 2.86
Pds5bQ4VA53 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC32.91■■■□□ 2.86
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms