Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Herc2Q4U2R1 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Herc2Q4U2R1 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Herc2Q4U2R1 Gm27357-201ENSMUST00000183754 135 ntBASIC11.29□□□□□ -0.6
Herc2Q4U2R1 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Herc2Q4U2R1 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Herc2Q4U2R1 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Herc2Q4U2R1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Herc2Q4U2R1 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC11.28□□□□□ -0.6
Herc2Q4U2R1 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Herc2Q4U2R1 Mir5130-201ENSMUST00000175160 84 ntBASIC11.28□□□□□ -0.6
Herc2Q4U2R1 Gm27459-201ENSMUST00000184860 107 ntBASIC11.28□□□□□ -0.6
Herc2Q4U2R1 Gm7791-201ENSMUST00000219066 539 ntBASIC11.28□□□□□ -0.6
Herc2Q4U2R1 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Herc2Q4U2R1 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Herc2Q4U2R1 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC11.28□□□□□ -0.6
Herc2Q4U2R1 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC11.28□□□□□ -0.6
Herc2Q4U2R1 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC11.28□□□□□ -0.6
Herc2Q4U2R1 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Herc2Q4U2R1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Herc2Q4U2R1 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Herc2Q4U2R1 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Herc2Q4U2R1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Herc2Q4U2R1 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Herc2Q4U2R1 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Herc2Q4U2R1 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Herc2Q4U2R1 Birc2-201ENSMUST00000054878 378 ntBASIC11.28□□□□□ -0.6
Herc2Q4U2R1 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Herc2Q4U2R1 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Herc2Q4U2R1 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Herc2Q4U2R1 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Herc2Q4U2R1 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Herc2Q4U2R1 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC11.27□□□□□ -0.6
Herc2Q4U2R1 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC11.27□□□□□ -0.6
Herc2Q4U2R1 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Herc2Q4U2R1 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Herc2Q4U2R1 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Herc2Q4U2R1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Herc2Q4U2R1 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC11.27□□□□□ -0.61
Herc2Q4U2R1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Herc2Q4U2R1 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC11.27□□□□□ -0.61
Herc2Q4U2R1 Gm38285-201ENSMUST00000192928 922 ntBASIC11.27□□□□□ -0.61
Herc2Q4U2R1 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Herc2Q4U2R1 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC11.27□□□□□ -0.61
Herc2Q4U2R1 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC11.27□□□□□ -0.61
Herc2Q4U2R1 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Herc2Q4U2R1 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Herc2Q4U2R1 Gm4217-201ENSMUST00000182243 1002 ntBASIC11.26□□□□□ -0.61
Herc2Q4U2R1 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Herc2Q4U2R1 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Herc2Q4U2R1 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Herc2Q4U2R1 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Herc2Q4U2R1 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Herc2Q4U2R1 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Herc2Q4U2R1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Herc2Q4U2R1 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Herc2Q4U2R1 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Herc2Q4U2R1 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Herc2Q4U2R1 Gm7370-201ENSMUST00000219471 767 ntBASIC11.26□□□□□ -0.61
Herc2Q4U2R1 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Herc2Q4U2R1 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Herc2Q4U2R1 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Herc2Q4U2R1 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Herc2Q4U2R1 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Herc2Q4U2R1 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Herc2Q4U2R1 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Herc2Q4U2R1 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Herc2Q4U2R1 AA386476-201ENSMUST00000098781 1665 ntBASIC11.26□□□□□ -0.61
Herc2Q4U2R1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC11.26□□□□□ -0.61
Herc2Q4U2R1 Gm13884-201ENSMUST00000118103 829 ntBASIC11.25□□□□□ -0.61
Herc2Q4U2R1 Gm15375-201ENSMUST00000119510 849 ntBASIC11.25□□□□□ -0.61
Herc2Q4U2R1 Gm11594-201ENSMUST00000122313 162 ntBASIC11.25□□□□□ -0.61
Herc2Q4U2R1 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Herc2Q4U2R1 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Herc2Q4U2R1 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Herc2Q4U2R1 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Herc2Q4U2R1 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC11.25□□□□□ -0.61
Herc2Q4U2R1 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Herc2Q4U2R1 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Herc2Q4U2R1 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Herc2Q4U2R1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Herc2Q4U2R1 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Herc2Q4U2R1 Gm43403-201ENSMUST00000198011 1786 ntBASIC11.25□□□□□ -0.61
Herc2Q4U2R1 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Herc2Q4U2R1 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Herc2Q4U2R1 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Herc2Q4U2R1 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC11.25□□□□□ -0.61
Herc2Q4U2R1 Gm5864-201ENSMUST00000202263 970 ntBASIC11.25□□□□□ -0.61
Herc2Q4U2R1 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC11.25□□□□□ -0.61
Herc2Q4U2R1 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Herc2Q4U2R1 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Herc2Q4U2R1 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Herc2Q4U2R1 Flg-201ENSMUST00000050758 1488 ntBASIC11.25□□□□□ -0.61
Herc2Q4U2R1 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Herc2Q4U2R1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Herc2Q4U2R1 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Herc2Q4U2R1 Gm2274-201ENSMUST00000184539 609 ntBASIC11.24□□□□□ -0.61
Herc2Q4U2R1 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Herc2Q4U2R1 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Herc2Q4U2R1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms