Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trim40Q3UWA4 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Trim40Q3UWA4 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim40Q3UWA4 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trim40Q3UWA4 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.53■□□□□ 0.4
Trim40Q3UWA4 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim40Q3UWA4 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim40Q3UWA4 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.52■□□□□ 0.4
Trim40Q3UWA4 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim40Q3UWA4 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Trim40Q3UWA4 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Trim40Q3UWA4 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Trim40Q3UWA4 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim40Q3UWA4 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim40Q3UWA4 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim40Q3UWA4 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim40Q3UWA4 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trim40Q3UWA4 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Trim40Q3UWA4 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim40Q3UWA4 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim40Q3UWA4 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim40Q3UWA4 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim40Q3UWA4 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.51■□□□□ 0.39
Trim40Q3UWA4 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Trim40Q3UWA4 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim40Q3UWA4 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trim40Q3UWA4 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Trim40Q3UWA4 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.5■□□□□ 0.39
Trim40Q3UWA4 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim40Q3UWA4 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim40Q3UWA4 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Trim40Q3UWA4 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim40Q3UWA4 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim40Q3UWA4 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim40Q3UWA4 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Trim40Q3UWA4 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim40Q3UWA4 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim40Q3UWA4 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim40Q3UWA4 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim40Q3UWA4 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim40Q3UWA4 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim40Q3UWA4 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim40Q3UWA4 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
Trim40Q3UWA4 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.5■□□□□ 0.39
Trim40Q3UWA4 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Trim40Q3UWA4 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.5■□□□□ 0.39
Trim40Q3UWA4 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim40Q3UWA4 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim40Q3UWA4 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.5■□□□□ 0.39
Trim40Q3UWA4 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Trim40Q3UWA4 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Trim40Q3UWA4 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim40Q3UWA4 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim40Q3UWA4 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim40Q3UWA4 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim40Q3UWA4 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim40Q3UWA4 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim40Q3UWA4 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Trim40Q3UWA4 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim40Q3UWA4 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Trim40Q3UWA4 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim40Q3UWA4 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim40Q3UWA4 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Trim40Q3UWA4 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim40Q3UWA4 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim40Q3UWA4 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim40Q3UWA4 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Trim40Q3UWA4 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim40Q3UWA4 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim40Q3UWA4 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trim40Q3UWA4 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim40Q3UWA4 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.48■□□□□ 0.39
Trim40Q3UWA4 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Trim40Q3UWA4 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Trim40Q3UWA4 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim40Q3UWA4 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trim40Q3UWA4 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Trim40Q3UWA4 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim40Q3UWA4 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.47■□□□□ 0.39
Trim40Q3UWA4 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trim40Q3UWA4 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.47■□□□□ 0.39
Trim40Q3UWA4 Gm22238-201ENSMUST00000175222 88 ntBASIC17.47■□□□□ 0.39
Trim40Q3UWA4 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim40Q3UWA4 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim40Q3UWA4 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Trim40Q3UWA4 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Trim40Q3UWA4 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trim40Q3UWA4 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim40Q3UWA4 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Trim40Q3UWA4 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim40Q3UWA4 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim40Q3UWA4 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim40Q3UWA4 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim40Q3UWA4 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.46■□□□□ 0.39
Trim40Q3UWA4 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.46■□□□□ 0.39
Trim40Q3UWA4 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim40Q3UWA4 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim40Q3UWA4 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trim40Q3UWA4 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trim40Q3UWA4 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms