Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.18■□□□□ 0.5
Rnf223Q3UV31 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf223Q3UV31 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf223Q3UV31 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf223Q3UV31 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf223Q3UV31 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Rnf223Q3UV31 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Rnf223Q3UV31 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf223Q3UV31 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf223Q3UV31 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf223Q3UV31 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf223Q3UV31 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rnf223Q3UV31 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf223Q3UV31 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf223Q3UV31 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf223Q3UV31 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.16■□□□□ 0.5
Rnf223Q3UV31 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Rnf223Q3UV31 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf223Q3UV31 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rnf223Q3UV31 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf223Q3UV31 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf223Q3UV31 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf223Q3UV31 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf223Q3UV31 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf223Q3UV31 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Rnf223Q3UV31 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Rnf223Q3UV31 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.15■□□□□ 0.5
Rnf223Q3UV31 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf223Q3UV31 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf223Q3UV31 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf223Q3UV31 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.15■□□□□ 0.5
Rnf223Q3UV31 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Rnf223Q3UV31 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.15■□□□□ 0.5
Rnf223Q3UV31 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Rnf223Q3UV31 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.15■□□□□ 0.5
Rnf223Q3UV31 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf223Q3UV31 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf223Q3UV31 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf223Q3UV31 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf223Q3UV31 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf223Q3UV31 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf223Q3UV31 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf223Q3UV31 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rnf223Q3UV31 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
Rnf223Q3UV31 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Rnf223Q3UV31 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Rnf223Q3UV31 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf223Q3UV31 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf223Q3UV31 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf223Q3UV31 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf223Q3UV31 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.14■□□□□ 0.49
Rnf223Q3UV31 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf223Q3UV31 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf223Q3UV31 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Rnf223Q3UV31 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rnf223Q3UV31 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf223Q3UV31 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Rnf223Q3UV31 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf223Q3UV31 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf223Q3UV31 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf223Q3UV31 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.13■□□□□ 0.49
Rnf223Q3UV31 Gm37856-201ENSMUST00000191634 999 ntBASIC18.13■□□□□ 0.49
Rnf223Q3UV31 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.13■□□□□ 0.49
Rnf223Q3UV31 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf223Q3UV31 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf223Q3UV31 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf223Q3UV31 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rnf223Q3UV31 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf223Q3UV31 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf223Q3UV31 Gm20760-201ENSMUST00000179197 648 ntBASIC18.12■□□□□ 0.49
Rnf223Q3UV31 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Rnf223Q3UV31 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Rnf223Q3UV31 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Rnf223Q3UV31 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf223Q3UV31 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Rnf223Q3UV31 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf223Q3UV31 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf223Q3UV31 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf223Q3UV31 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf223Q3UV31 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf223Q3UV31 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf223Q3UV31 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf223Q3UV31 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf223Q3UV31 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf223Q3UV31 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rnf223Q3UV31 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf223Q3UV31 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf223Q3UV31 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf223Q3UV31 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Rnf223Q3UV31 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf223Q3UV31 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.1■□□□□ 0.49
Rnf223Q3UV31 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Rnf223Q3UV31 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf223Q3UV31 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf223Q3UV31 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Rnf223Q3UV31 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.1■□□□□ 0.49
Rnf223Q3UV31 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC18.1■□□□□ 0.49
Rnf223Q3UV31 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf223Q3UV31 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rnf223Q3UV31 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms