Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cks1brtQ3UNC9 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Cks1brtQ3UNC9 Cdkn3-203ENSMUST00000227149 1952 ntBASIC13.54□□□□□ -0.24
Cks1brtQ3UNC9 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cks1brtQ3UNC9 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cks1brtQ3UNC9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cks1brtQ3UNC9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cks1brtQ3UNC9 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cks1brtQ3UNC9 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cks1brtQ3UNC9 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cks1brtQ3UNC9 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Cks1brtQ3UNC9 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cks1brtQ3UNC9 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cks1brtQ3UNC9 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cks1brtQ3UNC9 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC13.54□□□□□ -0.24
Cks1brtQ3UNC9 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC13.54□□□□□ -0.24
Cks1brtQ3UNC9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC13.54□□□□□ -0.24
Cks1brtQ3UNC9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cks1brtQ3UNC9 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cks1brtQ3UNC9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cks1brtQ3UNC9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC13.54□□□□□ -0.24
Cks1brtQ3UNC9 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cks1brtQ3UNC9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cks1brtQ3UNC9 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.54□□□□□ -0.24
Cks1brtQ3UNC9 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cks1brtQ3UNC9 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cks1brtQ3UNC9 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cks1brtQ3UNC9 Dmtn-210ENSMUST00000228824 2377 ntBASIC13.53□□□□□ -0.24
Cks1brtQ3UNC9 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cks1brtQ3UNC9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cks1brtQ3UNC9 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cks1brtQ3UNC9 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cks1brtQ3UNC9 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.53□□□□□ -0.24
Cks1brtQ3UNC9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cks1brtQ3UNC9 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cks1brtQ3UNC9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cks1brtQ3UNC9 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cks1brtQ3UNC9 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cks1brtQ3UNC9 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cks1brtQ3UNC9 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC13.53□□□□□ -0.24
Cks1brtQ3UNC9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cks1brtQ3UNC9 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Cks1brtQ3UNC9 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cks1brtQ3UNC9 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC13.53□□□□□ -0.24
Cks1brtQ3UNC9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cks1brtQ3UNC9 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cks1brtQ3UNC9 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cks1brtQ3UNC9 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cks1brtQ3UNC9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cks1brtQ3UNC9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cks1brtQ3UNC9 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cks1brtQ3UNC9 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cks1brtQ3UNC9 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cks1brtQ3UNC9 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Cks1brtQ3UNC9 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cks1brtQ3UNC9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cks1brtQ3UNC9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Cks1brtQ3UNC9 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Cks1brtQ3UNC9 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
Cks1brtQ3UNC9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cks1brtQ3UNC9 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.52□□□□□ -0.25
Cks1brtQ3UNC9 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cks1brtQ3UNC9 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cks1brtQ3UNC9 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cks1brtQ3UNC9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Cks1brtQ3UNC9 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cks1brtQ3UNC9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cks1brtQ3UNC9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cks1brtQ3UNC9 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cks1brtQ3UNC9 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cks1brtQ3UNC9 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cks1brtQ3UNC9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cks1brtQ3UNC9 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cks1brtQ3UNC9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Cks1brtQ3UNC9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Cks1brtQ3UNC9 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cks1brtQ3UNC9 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cks1brtQ3UNC9 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cks1brtQ3UNC9 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cks1brtQ3UNC9 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cks1brtQ3UNC9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cks1brtQ3UNC9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cks1brtQ3UNC9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cks1brtQ3UNC9 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Cks1brtQ3UNC9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Cks1brtQ3UNC9 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cks1brtQ3UNC9 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cks1brtQ3UNC9 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cks1brtQ3UNC9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cks1brtQ3UNC9 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cks1brtQ3UNC9 Dmtn-207ENSMUST00000228001 2437 ntBASIC13.51□□□□□ -0.25
Cks1brtQ3UNC9 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cks1brtQ3UNC9 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cks1brtQ3UNC9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cks1brtQ3UNC9 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cks1brtQ3UNC9 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cks1brtQ3UNC9 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cks1brtQ3UNC9 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Cks1brtQ3UNC9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cks1brtQ3UNC9 Gm43702-201ENSMUST00000198772 2546 ntBASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms