Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Serp2-204ENSMUST00000228055 705 ntBASIC15.88■□□□□ 0.13
Cln6Q3U466 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cln6Q3U466 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cln6Q3U466 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cln6Q3U466 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cln6Q3U466 Rarb-207ENSMUST00000225921 2756 ntBASIC15.88■□□□□ 0.13
Cln6Q3U466 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cln6Q3U466 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cln6Q3U466 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cln6Q3U466 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cln6Q3U466 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cln6Q3U466 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Cln6Q3U466 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Cln6Q3U466 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Cln6Q3U466 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Cln6Q3U466 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cln6Q3U466 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cln6Q3U466 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.87■□□□□ 0.13
Cln6Q3U466 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cln6Q3U466 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC15.87■□□□□ 0.13
Cln6Q3U466 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.87■□□□□ 0.13
Cln6Q3U466 Gm5576-201ENSMUST00000075809 1236 ntBASIC15.87■□□□□ 0.13
Cln6Q3U466 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cln6Q3U466 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cln6Q3U466 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cln6Q3U466 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cln6Q3U466 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cln6Q3U466 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Cln6Q3U466 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cln6Q3U466 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Cln6Q3U466 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cln6Q3U466 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Cln6Q3U466 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC15.86■□□□□ 0.13
Cln6Q3U466 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cln6Q3U466 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Cln6Q3U466 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Cln6Q3U466 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cln6Q3U466 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cln6Q3U466 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cln6Q3U466 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cln6Q3U466 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.86■□□□□ 0.13
Cln6Q3U466 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Cln6Q3U466 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cln6Q3U466 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cln6Q3U466 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Cln6Q3U466 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Cln6Q3U466 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Cln6Q3U466 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.86■□□□□ 0.13
Cln6Q3U466 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cln6Q3U466 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cln6Q3U466 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cln6Q3U466 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cln6Q3U466 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cln6Q3U466 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Cln6Q3U466 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Cln6Q3U466 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Cln6Q3U466 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.85■□□□□ 0.13
Cln6Q3U466 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cln6Q3U466 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.85■□□□□ 0.13
Cln6Q3U466 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Cln6Q3U466 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Cln6Q3U466 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cln6Q3U466 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cln6Q3U466 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cln6Q3U466 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cln6Q3U466 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cln6Q3U466 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cln6Q3U466 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Cln6Q3U466 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cln6Q3U466 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cln6Q3U466 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cln6Q3U466 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC15.84■□□□□ 0.13
Cln6Q3U466 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cln6Q3U466 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cln6Q3U466 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cln6Q3U466 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cln6Q3U466 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cln6Q3U466 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cln6Q3U466 BC021767-201ENSMUST00000126387 1716 ntBASIC15.84■□□□□ 0.13
Cln6Q3U466 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cln6Q3U466 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cln6Q3U466 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC15.84■□□□□ 0.13
Cln6Q3U466 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Cln6Q3U466 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC15.84■□□□□ 0.13
Cln6Q3U466 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.84■□□□□ 0.13
Cln6Q3U466 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cln6Q3U466 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.84■□□□□ 0.13
Cln6Q3U466 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Cln6Q3U466 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cln6Q3U466 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cln6Q3U466 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cln6Q3U466 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cln6Q3U466 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.83■□□□□ 0.13
Cln6Q3U466 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cln6Q3U466 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
Cln6Q3U466 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cln6Q3U466 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cln6Q3U466 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
Cln6Q3U466 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC15.83■□□□□ 0.12
Cln6Q3U466 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms