Protein–RNA interactions for Protein: Q3TZA2

Cdkl4, Cyclin-dependent kinase-like 4, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl4Q3TZA2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Cdkl4Q3TZA2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdkl4Q3TZA2 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdkl4Q3TZA2 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cdkl4Q3TZA2 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cdkl4Q3TZA2 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdkl4Q3TZA2 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdkl4Q3TZA2 Gm7290-201ENSMUST00000104990 617 ntBASIC18.69■□□□□ 0.58
Cdkl4Q3TZA2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Cdkl4Q3TZA2 Gm12918-201ENSMUST00000120234 636 ntBASIC18.69■□□□□ 0.58
Cdkl4Q3TZA2 Gm15710-201ENSMUST00000121821 636 ntBASIC18.69■□□□□ 0.58
Cdkl4Q3TZA2 Nespas-201ENSMUST00000143738 1083 ntBASIC18.69■□□□□ 0.58
Cdkl4Q3TZA2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Cdkl4Q3TZA2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.69■□□□□ 0.58
Cdkl4Q3TZA2 Gm5075-201ENSMUST00000196916 622 ntBASIC18.69■□□□□ 0.58
Cdkl4Q3TZA2 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.69■□□□□ 0.58
Cdkl4Q3TZA2 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.69■□□□□ 0.58
Cdkl4Q3TZA2 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdkl4Q3TZA2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Cdkl4Q3TZA2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.69■□□□□ 0.58
Cdkl4Q3TZA2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.69■□□□□ 0.58
Cdkl4Q3TZA2 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdkl4Q3TZA2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdkl4Q3TZA2 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdkl4Q3TZA2 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdkl4Q3TZA2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cdkl4Q3TZA2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Cdkl4Q3TZA2 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdkl4Q3TZA2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cdkl4Q3TZA2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdkl4Q3TZA2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdkl4Q3TZA2 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cdkl4Q3TZA2 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdkl4Q3TZA2 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdkl4Q3TZA2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdkl4Q3TZA2 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdkl4Q3TZA2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdkl4Q3TZA2 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
Cdkl4Q3TZA2 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cdkl4Q3TZA2 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdkl4Q3TZA2 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdkl4Q3TZA2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Cdkl4Q3TZA2 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cdkl4Q3TZA2 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdkl4Q3TZA2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdkl4Q3TZA2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdkl4Q3TZA2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.67■□□□□ 0.58
Cdkl4Q3TZA2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdkl4Q3TZA2 Gm6365-201ENSMUST00000054711 744 ntBASIC18.67■□□□□ 0.58
Cdkl4Q3TZA2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Cdkl4Q3TZA2 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdkl4Q3TZA2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdkl4Q3TZA2 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdkl4Q3TZA2 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdkl4Q3TZA2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdkl4Q3TZA2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdkl4Q3TZA2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.66■□□□□ 0.58
Cdkl4Q3TZA2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdkl4Q3TZA2 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Cdkl4Q3TZA2 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdkl4Q3TZA2 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdkl4Q3TZA2 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Cdkl4Q3TZA2 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Cdkl4Q3TZA2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cdkl4Q3TZA2 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdkl4Q3TZA2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdkl4Q3TZA2 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdkl4Q3TZA2 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Cdkl4Q3TZA2 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Cdkl4Q3TZA2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Cdkl4Q3TZA2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdkl4Q3TZA2 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdkl4Q3TZA2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Cdkl4Q3TZA2 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdkl4Q3TZA2 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdkl4Q3TZA2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.65■□□□□ 0.58
Cdkl4Q3TZA2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Cdkl4Q3TZA2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdkl4Q3TZA2 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.65■□□□□ 0.58
Cdkl4Q3TZA2 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdkl4Q3TZA2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Cdkl4Q3TZA2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdkl4Q3TZA2 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdkl4Q3TZA2 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdkl4Q3TZA2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Cdkl4Q3TZA2 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdkl4Q3TZA2 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdkl4Q3TZA2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdkl4Q3TZA2 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdkl4Q3TZA2 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Cdkl4Q3TZA2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Cdkl4Q3TZA2 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.64■□□□□ 0.57
Cdkl4Q3TZA2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Cdkl4Q3TZA2 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdkl4Q3TZA2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdkl4Q3TZA2 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cdkl4Q3TZA2 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.64■□□□□ 0.57
Cdkl4Q3TZA2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdkl4Q3TZA2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdkl4Q3TZA2 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms