Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Chd8Q09XV5 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd8Q09XV5 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Chd8Q09XV5 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Chd8Q09XV5 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.88■□□□□ 0.29
Chd8Q09XV5 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Chd8Q09XV5 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd8Q09XV5 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Chd8Q09XV5 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.88■□□□□ 0.29
Chd8Q09XV5 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd8Q09XV5 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Chd8Q09XV5 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Chd8Q09XV5 Gm18195-201ENSMUST00000207604 706 ntBASIC16.88■□□□□ 0.29
Chd8Q09XV5 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd8Q09XV5 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.88■□□□□ 0.29
Chd8Q09XV5 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd8Q09XV5 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.88■□□□□ 0.29
Chd8Q09XV5 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Chd8Q09XV5 Gm14057-201ENSMUST00000120631 482 ntBASIC16.87■□□□□ 0.29
Chd8Q09XV5 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC16.87■□□□□ 0.29
Chd8Q09XV5 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Chd8Q09XV5 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Chd8Q09XV5 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Chd8Q09XV5 Gm43672-201ENSMUST00000199072 1731 ntBASIC16.87■□□□□ 0.29
Chd8Q09XV5 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chd8Q09XV5 Gm9013-201ENSMUST00000132939 882 ntBASIC16.87■□□□□ 0.29
Chd8Q09XV5 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.87■□□□□ 0.29
Chd8Q09XV5 Gm10576-201ENSMUST00000191927 825 ntBASIC16.87■□□□□ 0.29
Chd8Q09XV5 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chd8Q09XV5 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chd8Q09XV5 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chd8Q09XV5 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chd8Q09XV5 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chd8Q09XV5 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chd8Q09XV5 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chd8Q09XV5 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chd8Q09XV5 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chd8Q09XV5 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Chd8Q09XV5 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
Chd8Q09XV5 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Chd8Q09XV5 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chd8Q09XV5 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.86■□□□□ 0.29
Chd8Q09XV5 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chd8Q09XV5 Gm27463-201ENSMUST00000183569 57 ntBASIC16.86■□□□□ 0.29
Chd8Q09XV5 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.86■□□□□ 0.29
Chd8Q09XV5 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Chd8Q09XV5 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chd8Q09XV5 Gm7860-201ENSMUST00000121190 879 ntBASIC16.85■□□□□ 0.29
Chd8Q09XV5 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.85■□□□□ 0.29
Chd8Q09XV5 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.85■□□□□ 0.29
Chd8Q09XV5 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chd8Q09XV5 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Chd8Q09XV5 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chd8Q09XV5 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chd8Q09XV5 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chd8Q09XV5 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.84■□□□□ 0.29
Chd8Q09XV5 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chd8Q09XV5 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chd8Q09XV5 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd8Q09XV5 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.84■□□□□ 0.29
Chd8Q09XV5 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chd8Q09XV5 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd8Q09XV5 Gm43347-201ENSMUST00000200226 580 ntBASIC16.84■□□□□ 0.29
Chd8Q09XV5 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.84■□□□□ 0.29
Chd8Q09XV5 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd8Q09XV5 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chd8Q09XV5 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.84■□□□□ 0.29
Chd8Q09XV5 Gm5264-201ENSMUST00000190584 848 ntBASIC16.84■□□□□ 0.29
Chd8Q09XV5 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.84■□□□□ 0.29
Chd8Q09XV5 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.84■□□□□ 0.29
Chd8Q09XV5 Gm43575-201ENSMUST00000196420 516 ntBASIC16.84■□□□□ 0.29
Chd8Q09XV5 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chd8Q09XV5 Gm21559-201ENSMUST00000220638 855 ntBASIC16.84■□□□□ 0.29
Chd8Q09XV5 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd8Q09XV5 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chd8Q09XV5 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chd8Q09XV5 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chd8Q09XV5 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chd8Q09XV5 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chd8Q09XV5 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chd8Q09XV5 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.83■□□□□ 0.28
Chd8Q09XV5 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Chd8Q09XV5 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chd8Q09XV5 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Chd8Q09XV5 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Chd8Q09XV5 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
Chd8Q09XV5 Gm15375-201ENSMUST00000119510 849 ntBASIC16.83■□□□□ 0.28
Chd8Q09XV5 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chd8Q09XV5 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chd8Q09XV5 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chd8Q09XV5 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chd8Q09XV5 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd8Q09XV5 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd8Q09XV5 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd8Q09XV5 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chd8Q09XV5 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Chd8Q09XV5 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chd8Q09XV5 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
Chd8Q09XV5 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chd8Q09XV5 Gm6736-201ENSMUST00000166583 948 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms