Protein–RNA interactions for Protein: P97742

Cpt1a, Carnitine O-palmitoyltransferase 1, liver isoform, mousemouse

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpt1aP97742 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cpt1aP97742 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cpt1aP97742 Gm5075-201ENSMUST00000196916 622 ntBASIC18.2■□□□□ 0.5
Cpt1aP97742 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpt1aP97742 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.2■□□□□ 0.5
Cpt1aP97742 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.2■□□□□ 0.5
Cpt1aP97742 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpt1aP97742 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpt1aP97742 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpt1aP97742 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cpt1aP97742 BC021767-201ENSMUST00000126387 1716 ntBASIC18.2■□□□□ 0.5
Cpt1aP97742 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpt1aP97742 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpt1aP97742 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpt1aP97742 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cpt1aP97742 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cpt1aP97742 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cpt1aP97742 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Cpt1aP97742 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Cpt1aP97742 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cpt1aP97742 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Cpt1aP97742 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cpt1aP97742 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cpt1aP97742 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpt1aP97742 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cpt1aP97742 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cpt1aP97742 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpt1aP97742 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpt1aP97742 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.18■□□□□ 0.5
Cpt1aP97742 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.18■□□□□ 0.5
Cpt1aP97742 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cpt1aP97742 Gm6365-201ENSMUST00000054711 744 ntBASIC18.18■□□□□ 0.5
Cpt1aP97742 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpt1aP97742 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpt1aP97742 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpt1aP97742 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Cpt1aP97742 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpt1aP97742 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cpt1aP97742 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpt1aP97742 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpt1aP97742 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpt1aP97742 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpt1aP97742 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpt1aP97742 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cpt1aP97742 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpt1aP97742 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cpt1aP97742 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpt1aP97742 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Cpt1aP97742 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.17■□□□□ 0.5
Cpt1aP97742 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.17■□□□□ 0.5
Cpt1aP97742 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpt1aP97742 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpt1aP97742 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpt1aP97742 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Cpt1aP97742 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Cpt1aP97742 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpt1aP97742 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Cpt1aP97742 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpt1aP97742 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpt1aP97742 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpt1aP97742 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.16■□□□□ 0.5
Cpt1aP97742 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cpt1aP97742 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cpt1aP97742 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cpt1aP97742 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Cpt1aP97742 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cpt1aP97742 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cpt1aP97742 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.16■□□□□ 0.5
Cpt1aP97742 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.16■□□□□ 0.5
Cpt1aP97742 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cpt1aP97742 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cpt1aP97742 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cpt1aP97742 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cpt1aP97742 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.16■□□□□ 0.5
Cpt1aP97742 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cpt1aP97742 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cpt1aP97742 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cpt1aP97742 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Cpt1aP97742 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.15■□□□□ 0.5
Cpt1aP97742 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cpt1aP97742 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.15■□□□□ 0.5
Cpt1aP97742 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Cpt1aP97742 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.15■□□□□ 0.5
Cpt1aP97742 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cpt1aP97742 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cpt1aP97742 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Cpt1aP97742 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cpt1aP97742 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cpt1aP97742 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.14■□□□□ 0.49
Cpt1aP97742 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cpt1aP97742 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.14■□□□□ 0.49
Cpt1aP97742 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cpt1aP97742 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cpt1aP97742 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cpt1aP97742 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cpt1aP97742 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cpt1aP97742 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Cpt1aP97742 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cpt1aP97742 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cpt1aP97742 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms