Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx3-2P97503 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx3-2P97503 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx3-2P97503 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx3-2P97503 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx3-2P97503 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Nkx3-2P97503 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx3-2P97503 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx3-2P97503 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx3-2P97503 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx3-2P97503 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Nkx3-2P97503 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.55■□□□□ 0.4
Nkx3-2P97503 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.55■□□□□ 0.4
Nkx3-2P97503 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx3-2P97503 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx3-2P97503 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx3-2P97503 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx3-2P97503 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Nkx3-2P97503 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.55■□□□□ 0.4
Nkx3-2P97503 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Nkx3-2P97503 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx3-2P97503 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx3-2P97503 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Nkx3-2P97503 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx3-2P97503 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.54■□□□□ 0.4
Nkx3-2P97503 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.54■□□□□ 0.4
Nkx3-2P97503 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Nkx3-2P97503 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx3-2P97503 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx3-2P97503 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx3-2P97503 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.54■□□□□ 0.4
Nkx3-2P97503 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Nkx3-2P97503 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Nkx3-2P97503 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx3-2P97503 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx3-2P97503 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx3-2P97503 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx3-2P97503 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Nkx3-2P97503 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx3-2P97503 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx3-2P97503 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx3-2P97503 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx3-2P97503 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Nkx3-2P97503 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx3-2P97503 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx3-2P97503 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx3-2P97503 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx3-2P97503 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Nkx3-2P97503 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx3-2P97503 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx3-2P97503 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx3-2P97503 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx3-2P97503 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.52■□□□□ 0.4
Nkx3-2P97503 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx3-2P97503 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx3-2P97503 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx3-2P97503 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx3-2P97503 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Nkx3-2P97503 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx3-2P97503 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.52■□□□□ 0.4
Nkx3-2P97503 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.52■□□□□ 0.4
Nkx3-2P97503 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.52■□□□□ 0.4
Nkx3-2P97503 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Nkx3-2P97503 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx3-2P97503 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx3-2P97503 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx3-2P97503 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Nkx3-2P97503 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx3-2P97503 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nkx3-2P97503 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nkx3-2P97503 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nkx3-2P97503 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx3-2P97503 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx3-2P97503 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
Nkx3-2P97503 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Nkx3-2P97503 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx3-2P97503 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx3-2P97503 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx3-2P97503 Golph3-205ENSMUST00000228671 2842 ntBASIC17.51■□□□□ 0.39
Nkx3-2P97503 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.51■□□□□ 0.39
Nkx3-2P97503 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx3-2P97503 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.51■□□□□ 0.39
Nkx3-2P97503 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx3-2P97503 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Nkx3-2P97503 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx3-2P97503 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx3-2P97503 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx3-2P97503 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx3-2P97503 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Nkx3-2P97503 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Nkx3-2P97503 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx3-2P97503 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx3-2P97503 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx3-2P97503 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx3-2P97503 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx3-2P97503 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx3-2P97503 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx3-2P97503 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx3-2P97503 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx3-2P97503 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms