Protein–RNA interactions for Protein: P70343

Casp4, Caspase-4, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp4P70343 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.52■□□□□ 0.72
Casp4P70343 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Casp4P70343 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Casp4P70343 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Casp4P70343 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Casp4P70343 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
Casp4P70343 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Casp4P70343 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.51■□□□□ 0.71
Casp4P70343 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.51■□□□□ 0.71
Casp4P70343 Gm42569-201ENSMUST00000200539 472 ntBASIC19.51■□□□□ 0.71
Casp4P70343 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Casp4P70343 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Casp4P70343 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Casp4P70343 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Casp4P70343 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Casp4P70343 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Casp4P70343 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Casp4P70343 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.5■□□□□ 0.71
Casp4P70343 Gm18671-201ENSMUST00000214826 683 ntBASIC19.5■□□□□ 0.71
Casp4P70343 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Casp4P70343 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
Casp4P70343 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Casp4P70343 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
Casp4P70343 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Casp4P70343 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Casp4P70343 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Casp4P70343 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Casp4P70343 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Casp4P70343 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Casp4P70343 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.49■□□□□ 0.71
Casp4P70343 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Casp4P70343 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Casp4P70343 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Casp4P70343 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Casp4P70343 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Casp4P70343 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Casp4P70343 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Casp4P70343 Reep4-203ENSMUST00000226563 1444 ntBASIC19.49■□□□□ 0.71
Casp4P70343 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Casp4P70343 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Casp4P70343 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Casp4P70343 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Casp4P70343 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Casp4P70343 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Casp4P70343 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.48■□□□□ 0.71
Casp4P70343 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Casp4P70343 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.48■□□□□ 0.71
Casp4P70343 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Casp4P70343 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Casp4P70343 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Casp4P70343 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Casp4P70343 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Casp4P70343 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Casp4P70343 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Casp4P70343 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Casp4P70343 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Casp4P70343 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Casp4P70343 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Casp4P70343 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Casp4P70343 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Casp4P70343 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Casp4P70343 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Casp4P70343 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Casp4P70343 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.47■□□□□ 0.71
Casp4P70343 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Casp4P70343 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.47■□□□□ 0.71
Casp4P70343 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Casp4P70343 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Casp4P70343 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Casp4P70343 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
Casp4P70343 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Casp4P70343 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Casp4P70343 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Casp4P70343 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Casp4P70343 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.46■□□□□ 0.71
Casp4P70343 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Casp4P70343 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Casp4P70343 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Casp4P70343 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.46■□□□□ 0.71
Casp4P70343 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.46■□□□□ 0.71
Casp4P70343 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Casp4P70343 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.46■□□□□ 0.71
Casp4P70343 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
Casp4P70343 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Casp4P70343 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Casp4P70343 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Casp4P70343 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Casp4P70343 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Casp4P70343 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Casp4P70343 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Casp4P70343 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Casp4P70343 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Casp4P70343 Gm10033-202ENSMUST00000211874 928 ntBASIC19.45■□□□□ 0.7
Casp4P70343 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.45■□□□□ 0.7
Casp4P70343 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Casp4P70343 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Casp4P70343 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Casp4P70343 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Casp4P70343 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Casp4P70343 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms