Protein–RNA interactions for Protein: P62878

Rbx1, E3 ubiquitin-protein ligase RBX1, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbx1P62878 Gm42922-201ENSMUST00000195887 2078 ntBASIC13.67□□□□□ -0.22
Rbx1P62878 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rbx1P62878 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rbx1P62878 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rbx1P62878 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rbx1P62878 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rbx1P62878 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rbx1P62878 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rbx1P62878 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rbx1P62878 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Rbx1P62878 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Rbx1P62878 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rbx1P62878 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC13.66□□□□□ -0.22
Rbx1P62878 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC13.66□□□□□ -0.22
Rbx1P62878 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rbx1P62878 Mir6236-201ENSMUST00000184437 123 ntBASIC13.66□□□□□ -0.22
Rbx1P62878 Gm43530-201ENSMUST00000195920 274 ntBASIC13.66□□□□□ -0.22
Rbx1P62878 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rbx1P62878 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Rbx1P62878 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rbx1P62878 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rbx1P62878 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rbx1P62878 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rbx1P62878 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Rbx1P62878 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC13.65□□□□□ -0.22
Rbx1P62878 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rbx1P62878 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rbx1P62878 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Rbx1P62878 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
Rbx1P62878 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rbx1P62878 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Rbx1P62878 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rbx1P62878 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC13.65□□□□□ -0.22
Rbx1P62878 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Rbx1P62878 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rbx1P62878 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Rbx1P62878 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
Rbx1P62878 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rbx1P62878 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rbx1P62878 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rbx1P62878 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rbx1P62878 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rbx1P62878 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rbx1P62878 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Rbx1P62878 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rbx1P62878 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rbx1P62878 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Rbx1P62878 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rbx1P62878 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rbx1P62878 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC13.64□□□□□ -0.23
Rbx1P62878 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC13.64□□□□□ -0.23
Rbx1P62878 Gm10657-201ENSMUST00000193528 1031 ntBASIC13.64□□□□□ -0.23
Rbx1P62878 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Rbx1P62878 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC13.64□□□□□ -0.23
Rbx1P62878 Gm9959-201ENSMUST00000068277 390 ntBASIC13.64□□□□□ -0.23
Rbx1P62878 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Rbx1P62878 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Rbx1P62878 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rbx1P62878 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rbx1P62878 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Rbx1P62878 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rbx1P62878 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rbx1P62878 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC13.64□□□□□ -0.23
Rbx1P62878 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rbx1P62878 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rbx1P62878 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rbx1P62878 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rbx1P62878 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rbx1P62878 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rbx1P62878 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rbx1P62878 Dmtn-210ENSMUST00000228824 2377 ntBASIC13.63□□□□□ -0.23
Rbx1P62878 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC13.63□□□□□ -0.23
Rbx1P62878 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Rbx1P62878 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rbx1P62878 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Rbx1P62878 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rbx1P62878 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Rbx1P62878 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rbx1P62878 Gm43909-201ENSMUST00000203443 1876 ntBASIC13.63□□□□□ -0.23
Rbx1P62878 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Rbx1P62878 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rbx1P62878 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rbx1P62878 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rbx1P62878 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rbx1P62878 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rbx1P62878 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rbx1P62878 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rbx1P62878 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rbx1P62878 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rbx1P62878 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Rbx1P62878 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC13.62□□□□□ -0.23
Rbx1P62878 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rbx1P62878 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rbx1P62878 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rbx1P62878 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC13.62□□□□□ -0.23
Rbx1P62878 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC13.62□□□□□ -0.23
Rbx1P62878 AC093043.1-201ENSMUST00000226700 898 ntBASIC13.62□□□□□ -0.23
Rbx1P62878 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rbx1P62878 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rbx1P62878 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms