Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Sec61a1P61620 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sec61a1P61620 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sec61a1P61620 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sec61a1P61620 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sec61a1P61620 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sec61a1P61620 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Sec61a1P61620 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sec61a1P61620 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Sec61a1P61620 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Sec61a1P61620 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sec61a1P61620 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sec61a1P61620 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Sec61a1P61620 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sec61a1P61620 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sec61a1P61620 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.4■□□□□ 0.22
Sec61a1P61620 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.4■□□□□ 0.22
Sec61a1P61620 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sec61a1P61620 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sec61a1P61620 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sec61a1P61620 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Sec61a1P61620 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Sec61a1P61620 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Sec61a1P61620 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sec61a1P61620 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sec61a1P61620 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sec61a1P61620 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sec61a1P61620 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Sec61a1P61620 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.39■□□□□ 0.21
Sec61a1P61620 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
Sec61a1P61620 Gm40848-201ENSMUST00000221998 324 ntBASIC16.39■□□□□ 0.21
Sec61a1P61620 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sec61a1P61620 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Sec61a1P61620 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sec61a1P61620 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC16.39■□□□□ 0.21
Sec61a1P61620 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sec61a1P61620 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Sec61a1P61620 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sec61a1P61620 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sec61a1P61620 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sec61a1P61620 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sec61a1P61620 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sec61a1P61620 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.38■□□□□ 0.21
Sec61a1P61620 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sec61a1P61620 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sec61a1P61620 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sec61a1P61620 Gm26833-201ENSMUST00000180899 440 ntBASIC16.38■□□□□ 0.21
Sec61a1P61620 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.38■□□□□ 0.21
Sec61a1P61620 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sec61a1P61620 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sec61a1P61620 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sec61a1P61620 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sec61a1P61620 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sec61a1P61620 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sec61a1P61620 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sec61a1P61620 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Sec61a1P61620 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sec61a1P61620 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sec61a1P61620 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Sec61a1P61620 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sec61a1P61620 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sec61a1P61620 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Sec61a1P61620 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sec61a1P61620 BC021767-201ENSMUST00000126387 1716 ntBASIC16.37■□□□□ 0.21
Sec61a1P61620 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sec61a1P61620 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Sec61a1P61620 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sec61a1P61620 Cdc34b-202ENSMUST00000188741 1252 ntBASIC16.37■□□□□ 0.21
Sec61a1P61620 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sec61a1P61620 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Sec61a1P61620 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sec61a1P61620 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Sec61a1P61620 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Sec61a1P61620 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sec61a1P61620 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sec61a1P61620 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Sec61a1P61620 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.37■□□□□ 0.21
Sec61a1P61620 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Sec61a1P61620 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Sec61a1P61620 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sec61a1P61620 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.37■□□□□ 0.21
Sec61a1P61620 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sec61a1P61620 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sec61a1P61620 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sec61a1P61620 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.36■□□□□ 0.21
Sec61a1P61620 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Sec61a1P61620 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sec61a1P61620 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.36■□□□□ 0.21
Sec61a1P61620 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sec61a1P61620 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Sec61a1P61620 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.36■□□□□ 0.21
Sec61a1P61620 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sec61a1P61620 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sec61a1P61620 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sec61a1P61620 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sec61a1P61620 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sec61a1P61620 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sec61a1P61620 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sec61a1P61620 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sec61a1P61620 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms