Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Tpm1P58771 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Tpm1P58771 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tpm1P58771 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tpm1P58771 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.82■□□□□ 0.92
Tpm1P58771 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tpm1P58771 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Tpm1P58771 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Tpm1P58771 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tpm1P58771 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tpm1P58771 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Tpm1P58771 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Tpm1P58771 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.82■□□□□ 0.92
Tpm1P58771 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.82■□□□□ 0.92
Tpm1P58771 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Tpm1P58771 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
Tpm1P58771 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Tpm1P58771 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tpm1P58771 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Tpm1P58771 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tpm1P58771 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tpm1P58771 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tpm1P58771 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tpm1P58771 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tpm1P58771 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.81■□□□□ 0.92
Tpm1P58771 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tpm1P58771 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tpm1P58771 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tpm1P58771 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tpm1P58771 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tpm1P58771 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Tpm1P58771 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tpm1P58771 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tpm1P58771 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tpm1P58771 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tpm1P58771 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tpm1P58771 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tpm1P58771 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tpm1P58771 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Tpm1P58771 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
Tpm1P58771 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tpm1P58771 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.8■□□□□ 0.92
Tpm1P58771 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tpm1P58771 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tpm1P58771 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tpm1P58771 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC20.8■□□□□ 0.92
Tpm1P58771 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tpm1P58771 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tpm1P58771 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.79■□□□□ 0.92
Tpm1P58771 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tpm1P58771 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tpm1P58771 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.79■□□□□ 0.92
Tpm1P58771 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tpm1P58771 Serp2-204ENSMUST00000228055 705 ntBASIC20.79■□□□□ 0.92
Tpm1P58771 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Tpm1P58771 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tpm1P58771 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Tpm1P58771 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tpm1P58771 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Tpm1P58771 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tpm1P58771 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Tpm1P58771 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tpm1P58771 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tpm1P58771 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tpm1P58771 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tpm1P58771 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tpm1P58771 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tpm1P58771 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tpm1P58771 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tpm1P58771 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tpm1P58771 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tpm1P58771 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tpm1P58771 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Tpm1P58771 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.77■□□□□ 0.92
Tpm1P58771 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tpm1P58771 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tpm1P58771 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.77■□□□□ 0.92
Tpm1P58771 Gm9959-201ENSMUST00000068277 390 ntBASIC20.77■□□□□ 0.92
Tpm1P58771 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tpm1P58771 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tpm1P58771 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tpm1P58771 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Tpm1P58771 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Tpm1P58771 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Tpm1P58771 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
Tpm1P58771 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Tpm1P58771 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Tpm1P58771 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.76■□□□□ 0.91
Tpm1P58771 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tpm1P58771 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tpm1P58771 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tpm1P58771 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tpm1P58771 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tpm1P58771 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tpm1P58771 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tpm1P58771 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Tpm1P58771 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.76■□□□□ 0.91
Tpm1P58771 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tpm1P58771 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Tpm1P58771 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms