Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lim2P56563 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lim2P56563 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Lim2P56563 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lim2P56563 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.7■□□□□ 0.58
Lim2P56563 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.7■□□□□ 0.58
Lim2P56563 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lim2P56563 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lim2P56563 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lim2P56563 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lim2P56563 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lim2P56563 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lim2P56563 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lim2P56563 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lim2P56563 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lim2P56563 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lim2P56563 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Lim2P56563 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lim2P56563 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.69■□□□□ 0.58
Lim2P56563 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Lim2P56563 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lim2P56563 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lim2P56563 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lim2P56563 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lim2P56563 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Lim2P56563 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Lim2P56563 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.68■□□□□ 0.58
Lim2P56563 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Lim2P56563 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.68■□□□□ 0.58
Lim2P56563 Gm6420-201ENSMUST00000193885 723 ntBASIC18.68■□□□□ 0.58
Lim2P56563 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Lim2P56563 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Lim2P56563 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.68■□□□□ 0.58
Lim2P56563 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.67■□□□□ 0.58
Lim2P56563 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Lim2P56563 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Lim2P56563 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lim2P56563 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lim2P56563 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lim2P56563 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lim2P56563 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lim2P56563 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Lim2P56563 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Lim2P56563 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lim2P56563 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lim2P56563 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lim2P56563 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lim2P56563 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Lim2P56563 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lim2P56563 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lim2P56563 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lim2P56563 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Lim2P56563 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Lim2P56563 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lim2P56563 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Lim2P56563 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lim2P56563 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lim2P56563 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lim2P56563 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Lim2P56563 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.65■□□□□ 0.58
Lim2P56563 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Lim2P56563 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lim2P56563 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lim2P56563 Nespas-201ENSMUST00000143738 1083 ntBASIC18.65■□□□□ 0.58
Lim2P56563 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lim2P56563 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lim2P56563 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lim2P56563 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lim2P56563 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lim2P56563 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lim2P56563 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Lim2P56563 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Lim2P56563 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Lim2P56563 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Lim2P56563 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Lim2P56563 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.63■□□□□ 0.57
Lim2P56563 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lim2P56563 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lim2P56563 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
Lim2P56563 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lim2P56563 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lim2P56563 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Lim2P56563 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.63■□□□□ 0.57
Lim2P56563 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Lim2P56563 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lim2P56563 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lim2P56563 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Lim2P56563 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lim2P56563 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lim2P56563 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Lim2P56563 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lim2P56563 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lim2P56563 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Lim2P56563 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.63■□□□□ 0.57
Lim2P56563 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lim2P56563 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lim2P56563 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Lim2P56563 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Lim2P56563 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Lim2P56563 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms