Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Cdh11P55288 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh11P55288 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh11P55288 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdh11P55288 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh11P55288 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Cdh11P55288 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh11P55288 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh11P55288 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Cdh11P55288 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh11P55288 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh11P55288 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh11P55288 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.98■□□□□ 0.31
Cdh11P55288 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh11P55288 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.98■□□□□ 0.31
Cdh11P55288 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.98■□□□□ 0.31
Cdh11P55288 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh11P55288 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh11P55288 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh11P55288 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh11P55288 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdh11P55288 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdh11P55288 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdh11P55288 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdh11P55288 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdh11P55288 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Cdh11P55288 Gm11421-201ENSMUST00000122124 294 ntBASIC16.97■□□□□ 0.31
Cdh11P55288 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC16.97■□□□□ 0.31
Cdh11P55288 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Cdh11P55288 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cdh11P55288 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdh11P55288 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdh11P55288 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdh11P55288 Gm5953-201ENSMUST00000220644 2616 ntBASIC16.97■□□□□ 0.31
Cdh11P55288 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdh11P55288 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdh11P55288 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cdh11P55288 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdh11P55288 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdh11P55288 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdh11P55288 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdh11P55288 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cdh11P55288 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.96■□□□□ 0.31
Cdh11P55288 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdh11P55288 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.96■□□□□ 0.31
Cdh11P55288 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Cdh11P55288 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdh11P55288 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Cdh11P55288 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Cdh11P55288 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Cdh11P55288 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.96■□□□□ 0.3
Cdh11P55288 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Cdh11P55288 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cdh11P55288 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdh11P55288 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Cdh11P55288 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdh11P55288 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdh11P55288 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdh11P55288 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.95■□□□□ 0.3
Cdh11P55288 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdh11P55288 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdh11P55288 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdh11P55288 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdh11P55288 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.95■□□□□ 0.3
Cdh11P55288 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.95■□□□□ 0.3
Cdh11P55288 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
Cdh11P55288 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Cdh11P55288 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Cdh11P55288 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdh11P55288 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdh11P55288 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.95■□□□□ 0.3
Cdh11P55288 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdh11P55288 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdh11P55288 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdh11P55288 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Cdh11P55288 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdh11P55288 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdh11P55288 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Cdh11P55288 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdh11P55288 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdh11P55288 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdh11P55288 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.94■□□□□ 0.3
Cdh11P55288 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Cdh11P55288 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cdh11P55288 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Cdh11P55288 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.94■□□□□ 0.3
Cdh11P55288 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.94■□□□□ 0.3
Cdh11P55288 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdh11P55288 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdh11P55288 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdh11P55288 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Cdh11P55288 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cdh11P55288 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Cdh11P55288 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Cdh11P55288 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdh11P55288 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC16.93■□□□□ 0.3
Cdh11P55288 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Cdh11P55288 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.93■□□□□ 0.3
Cdh11P55288 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.93■□□□□ 0.3
Cdh11P55288 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms