Protein–RNA interactions for Protein: P54869

Hmgcs2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, mousemouse

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs2P54869 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hmgcs2P54869 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hmgcs2P54869 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.89■□□□□ 0.94
Hmgcs2P54869 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Hmgcs2P54869 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hmgcs2P54869 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.89■□□□□ 0.93
Hmgcs2P54869 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.89■□□□□ 0.93
Hmgcs2P54869 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Hmgcs2P54869 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.89■□□□□ 0.93
Hmgcs2P54869 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hmgcs2P54869 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hmgcs2P54869 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Hmgcs2P54869 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hmgcs2P54869 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hmgcs2P54869 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.88■□□□□ 0.93
Hmgcs2P54869 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Hmgcs2P54869 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hmgcs2P54869 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Hmgcs2P54869 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.87■□□□□ 0.93
Hmgcs2P54869 CT010444.2-201ENSMUST00000217877 1629 ntBASIC20.87■□□□□ 0.93
Hmgcs2P54869 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.87■□□□□ 0.93
Hmgcs2P54869 Mir1199-201ENSMUST00000117015 119 ntBASIC20.87■□□□□ 0.93
Hmgcs2P54869 Gm15565-201ENSMUST00000118890 427 ntBASIC20.87■□□□□ 0.93
Hmgcs2P54869 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.87■□□□□ 0.93
Hmgcs2P54869 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.87■□□□□ 0.93
Hmgcs2P54869 Gm37055-201ENSMUST00000191866 133 ntBASIC20.87■□□□□ 0.93
Hmgcs2P54869 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Hmgcs2P54869 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Hmgcs2P54869 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hmgcs2P54869 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Hmgcs2P54869 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Hmgcs2P54869 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hmgcs2P54869 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hmgcs2P54869 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hmgcs2P54869 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.87■□□□□ 0.93
Hmgcs2P54869 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hmgcs2P54869 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hmgcs2P54869 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Hmgcs2P54869 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hmgcs2P54869 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Hmgcs2P54869 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hmgcs2P54869 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.86■□□□□ 0.93
Hmgcs2P54869 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.86■□□□□ 0.93
Hmgcs2P54869 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.86■□□□□ 0.93
Hmgcs2P54869 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
Hmgcs2P54869 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.86■□□□□ 0.93
Hmgcs2P54869 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
Hmgcs2P54869 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Hmgcs2P54869 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hmgcs2P54869 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
Hmgcs2P54869 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hmgcs2P54869 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Hmgcs2P54869 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hmgcs2P54869 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Hmgcs2P54869 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Hmgcs2P54869 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.85■□□□□ 0.93
Hmgcs2P54869 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.85■□□□□ 0.93
Hmgcs2P54869 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hmgcs2P54869 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Hmgcs2P54869 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hmgcs2P54869 Flg-201ENSMUST00000050758 1488 ntBASIC20.84■□□□□ 0.93
Hmgcs2P54869 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Hmgcs2P54869 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.84■□□□□ 0.93
Hmgcs2P54869 Gm11927-201ENSMUST00000118472 759 ntBASIC20.84■□□□□ 0.93
Hmgcs2P54869 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hmgcs2P54869 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.84■□□□□ 0.93
Hmgcs2P54869 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hmgcs2P54869 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Hmgcs2P54869 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hmgcs2P54869 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.83■□□□□ 0.93
Hmgcs2P54869 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hmgcs2P54869 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hmgcs2P54869 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hmgcs2P54869 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hmgcs2P54869 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hmgcs2P54869 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hmgcs2P54869 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Hmgcs2P54869 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.83■□□□□ 0.93
Hmgcs2P54869 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Hmgcs2P54869 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.83■□□□□ 0.92
Hmgcs2P54869 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Hmgcs2P54869 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hmgcs2P54869 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Hmgcs2P54869 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hmgcs2P54869 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hmgcs2P54869 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hmgcs2P54869 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Hmgcs2P54869 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.82■□□□□ 0.92
Hmgcs2P54869 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Hmgcs2P54869 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hmgcs2P54869 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Hmgcs2P54869 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hmgcs2P54869 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hmgcs2P54869 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Hmgcs2P54869 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Hmgcs2P54869 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.81■□□□□ 0.92
Hmgcs2P54869 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Hmgcs2P54869 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.81■□□□□ 0.92
Hmgcs2P54869 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Hmgcs2P54869 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms