Protein–RNA interactions for Protein: P53668

Limk1, LIM domain kinase 1, mousemouse

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk1P53668 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.29■□□□□ 0.52
Limk1P53668 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Limk1P53668 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Limk1P53668 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Limk1P53668 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Limk1P53668 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.28■□□□□ 0.52
Limk1P53668 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.28■□□□□ 0.52
Limk1P53668 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC18.28■□□□□ 0.52
Limk1P53668 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Limk1P53668 Gm11249-201ENSMUST00000117071 859 ntBASIC18.28■□□□□ 0.52
Limk1P53668 Gm6433-201ENSMUST00000118634 875 ntBASIC18.28■□□□□ 0.52
Limk1P53668 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Limk1P53668 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Limk1P53668 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Limk1P53668 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.28■□□□□ 0.52
Limk1P53668 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Limk1P53668 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Limk1P53668 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Limk1P53668 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Limk1P53668 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Limk1P53668 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Limk1P53668 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Limk1P53668 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.27■□□□□ 0.52
Limk1P53668 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Limk1P53668 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Limk1P53668 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Limk1P53668 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Limk1P53668 Gm10231-201ENSMUST00000181584 441 ntBASIC18.27■□□□□ 0.52
Limk1P53668 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Limk1P53668 Gm10175-202ENSMUST00000208752 441 ntBASIC18.27■□□□□ 0.52
Limk1P53668 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Limk1P53668 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Limk1P53668 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Limk1P53668 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Limk1P53668 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Limk1P53668 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Limk1P53668 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.51
Limk1P53668 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Limk1P53668 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Limk1P53668 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Limk1P53668 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Limk1P53668 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.26■□□□□ 0.51
Limk1P53668 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Limk1P53668 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Limk1P53668 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.26■□□□□ 0.51
Limk1P53668 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Limk1P53668 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Limk1P53668 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Limk1P53668 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Limk1P53668 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Limk1P53668 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Limk1P53668 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Limk1P53668 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Limk1P53668 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.26■□□□□ 0.51
Limk1P53668 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Limk1P53668 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.25■□□□□ 0.51
Limk1P53668 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Limk1P53668 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.25■□□□□ 0.51
Limk1P53668 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Limk1P53668 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Limk1P53668 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC18.25■□□□□ 0.51
Limk1P53668 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.25■□□□□ 0.51
Limk1P53668 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.25■□□□□ 0.51
Limk1P53668 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.25■□□□□ 0.51
Limk1P53668 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Limk1P53668 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Limk1P53668 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Limk1P53668 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Limk1P53668 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Limk1P53668 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.24■□□□□ 0.51
Limk1P53668 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Limk1P53668 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
Limk1P53668 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Limk1P53668 Gm7860-201ENSMUST00000121190 879 ntBASIC18.24■□□□□ 0.51
Limk1P53668 Gm43799-201ENSMUST00000201845 579 ntBASIC18.24■□□□□ 0.51
Limk1P53668 Gm44549-201ENSMUST00000208351 577 ntBASIC18.24■□□□□ 0.51
Limk1P53668 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.24■□□□□ 0.51
Limk1P53668 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Limk1P53668 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Limk1P53668 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Limk1P53668 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Limk1P53668 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Limk1P53668 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Limk1P53668 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Limk1P53668 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Limk1P53668 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Limk1P53668 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Limk1P53668 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Limk1P53668 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.23■□□□□ 0.51
Limk1P53668 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.23■□□□□ 0.51
Limk1P53668 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Limk1P53668 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Limk1P53668 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Limk1P53668 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Limk1P53668 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.23■□□□□ 0.51
Limk1P53668 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Limk1P53668 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Limk1P53668 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Limk1P53668 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Limk1P53668 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms