Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Rncr4-201ENSMUST00000194541 2234 ntBASIC19■□□□□ 0.63
Lhx3P50481 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lhx3P50481 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Lhx3P50481 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Lhx3P50481 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Lhx3P50481 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lhx3P50481 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19■□□□□ 0.63
Lhx3P50481 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Lhx3P50481 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lhx3P50481 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lhx3P50481 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19■□□□□ 0.63
Lhx3P50481 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Lhx3P50481 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Lhx3P50481 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lhx3P50481 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.99■□□□□ 0.63
Lhx3P50481 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lhx3P50481 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lhx3P50481 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.99■□□□□ 0.63
Lhx3P50481 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Lhx3P50481 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Lhx3P50481 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lhx3P50481 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lhx3P50481 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Lhx3P50481 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Lhx3P50481 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lhx3P50481 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Lhx3P50481 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.98■□□□□ 0.63
Lhx3P50481 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.98■□□□□ 0.63
Lhx3P50481 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lhx3P50481 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Lhx3P50481 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lhx3P50481 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Lhx3P50481 Gm26524-201ENSMUST00000192339 390 ntBASIC18.98■□□□□ 0.63
Lhx3P50481 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.98■□□□□ 0.63
Lhx3P50481 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lhx3P50481 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.98■□□□□ 0.63
Lhx3P50481 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lhx3P50481 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Lhx3P50481 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Lhx3P50481 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lhx3P50481 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lhx3P50481 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lhx3P50481 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.97■□□□□ 0.63
Lhx3P50481 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.97■□□□□ 0.63
Lhx3P50481 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lhx3P50481 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Lhx3P50481 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lhx3P50481 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.97■□□□□ 0.63
Lhx3P50481 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lhx3P50481 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lhx3P50481 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Lhx3P50481 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Lhx3P50481 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lhx3P50481 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lhx3P50481 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lhx3P50481 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lhx3P50481 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Lhx3P50481 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.96■□□□□ 0.63
Lhx3P50481 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.96■□□□□ 0.63
Lhx3P50481 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lhx3P50481 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.96■□□□□ 0.63
Lhx3P50481 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lhx3P50481 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lhx3P50481 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lhx3P50481 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Lhx3P50481 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Lhx3P50481 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.96■□□□□ 0.63
Lhx3P50481 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Lhx3P50481 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Lhx3P50481 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Lhx3P50481 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lhx3P50481 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.95■□□□□ 0.62
Lhx3P50481 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lhx3P50481 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.95■□□□□ 0.62
Lhx3P50481 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lhx3P50481 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lhx3P50481 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lhx3P50481 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.95■□□□□ 0.62
Lhx3P50481 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Lhx3P50481 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Lhx3P50481 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Lhx3P50481 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.95■□□□□ 0.62
Lhx3P50481 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Lhx3P50481 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lhx3P50481 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lhx3P50481 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lhx3P50481 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Lhx3P50481 Gm5408-201ENSMUST00000197998 747 ntBASIC18.94■□□□□ 0.62
Lhx3P50481 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.94■□□□□ 0.62
Lhx3P50481 Gm4968-201ENSMUST00000071458 858 ntBASIC18.94■□□□□ 0.62
Lhx3P50481 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lhx3P50481 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.94■□□□□ 0.62
Lhx3P50481 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lhx3P50481 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
Lhx3P50481 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.94■□□□□ 0.62
Lhx3P50481 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Lhx3P50481 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lhx3P50481 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Lhx3P50481 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Lhx3P50481 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms