Protein–RNA interactions for Protein: P49919

Cdkn1c, Cyclin-dependent kinase inhibitor 1C, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1cP49919 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cdkn1cP49919 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdkn1cP49919 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdkn1cP49919 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdkn1cP49919 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdkn1cP49919 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdkn1cP49919 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdkn1cP49919 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cdkn1cP49919 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Cdkn1cP49919 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cdkn1cP49919 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdkn1cP49919 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdkn1cP49919 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdkn1cP49919 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdkn1cP49919 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdkn1cP49919 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Cdkn1cP49919 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cdkn1cP49919 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdkn1cP49919 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdkn1cP49919 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdkn1cP49919 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.58■□□□□ 0.89
Cdkn1cP49919 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdkn1cP49919 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC20.58■□□□□ 0.89
Cdkn1cP49919 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdkn1cP49919 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cdkn1cP49919 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cdkn1cP49919 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Cdkn1cP49919 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Cdkn1cP49919 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Cdkn1cP49919 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cdkn1cP49919 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdkn1cP49919 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
Cdkn1cP49919 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdkn1cP49919 Gm43530-201ENSMUST00000195920 274 ntBASIC20.57■□□□□ 0.88
Cdkn1cP49919 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdkn1cP49919 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Cdkn1cP49919 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdkn1cP49919 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdkn1cP49919 Shroom3-211ENSMUST00000225438 5742 ntBASIC20.56■□□□□ 0.88
Cdkn1cP49919 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdkn1cP49919 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.56■□□□□ 0.88
Cdkn1cP49919 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Cdkn1cP49919 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.56■□□□□ 0.88
Cdkn1cP49919 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.56■□□□□ 0.88
Cdkn1cP49919 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdkn1cP49919 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdkn1cP49919 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdkn1cP49919 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdkn1cP49919 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Cdkn1cP49919 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdkn1cP49919 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC20.55■□□□□ 0.88
Cdkn1cP49919 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdkn1cP49919 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdkn1cP49919 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdkn1cP49919 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cdkn1cP49919 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdkn1cP49919 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdkn1cP49919 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC20.55■□□□□ 0.88
Cdkn1cP49919 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdkn1cP49919 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdkn1cP49919 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdkn1cP49919 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Cdkn1cP49919 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Cdkn1cP49919 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Cdkn1cP49919 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdkn1cP49919 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdkn1cP49919 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.54■□□□□ 0.88
Cdkn1cP49919 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cdkn1cP49919 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdkn1cP49919 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Cdkn1cP49919 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdkn1cP49919 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cdkn1cP49919 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Cdkn1cP49919 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cdkn1cP49919 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cdkn1cP49919 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdkn1cP49919 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdkn1cP49919 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cdkn1cP49919 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Cdkn1cP49919 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdkn1cP49919 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Cdkn1cP49919 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdkn1cP49919 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.53■□□□□ 0.88
Cdkn1cP49919 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdkn1cP49919 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdkn1cP49919 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdkn1cP49919 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cdkn1cP49919 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdkn1cP49919 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdkn1cP49919 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Cdkn1cP49919 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdkn1cP49919 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.52■□□□□ 0.88
Cdkn1cP49919 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdkn1cP49919 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cdkn1cP49919 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.52■□□□□ 0.88
Cdkn1cP49919 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Cdkn1cP49919 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Cdkn1cP49919 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cdkn1cP49919 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC20.51■□□□□ 0.87
Cdkn1cP49919 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms