Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Brca1P48754 Gm7889-201ENSMUST00000185591 958 ntBASIC21.26■□□□□ 0.99
Brca1P48754 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC21.26■□□□□ 0.99
Brca1P48754 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Brca1P48754 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Brca1P48754 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Brca1P48754 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Brca1P48754 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Brca1P48754 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Brca1P48754 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Brca1P48754 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
Brca1P48754 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC21.25■□□□□ 0.99
Brca1P48754 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC21.25■□□□□ 0.99
Brca1P48754 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC21.25■□□□□ 0.99
Brca1P48754 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC21.25■□□□□ 0.99
Brca1P48754 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Brca1P48754 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Brca1P48754 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
Brca1P48754 Gm10517-202ENSMUST00000192970 758 ntBASIC21.25■□□□□ 0.99
Brca1P48754 Arhgef4-208ENSMUST00000211073 171 ntBASIC21.25■□□□□ 0.99
Brca1P48754 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Brca1P48754 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Brca1P48754 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
Brca1P48754 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Brca1P48754 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Brca1P48754 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Brca1P48754 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.24■□□□□ 0.99
Brca1P48754 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Brca1P48754 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Brca1P48754 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Brca1P48754 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Brca1P48754 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Brca1P48754 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Brca1P48754 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Brca1P48754 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC21.23■□□□□ 0.99
Brca1P48754 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Brca1P48754 Gm30025-201ENSMUST00000218555 728 ntBASIC21.23■□□□□ 0.99
Brca1P48754 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Brca1P48754 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Brca1P48754 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.23■□□□□ 0.99
Brca1P48754 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Brca1P48754 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Brca1P48754 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC21.22■□□□□ 0.99
Brca1P48754 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Brca1P48754 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Brca1P48754 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Brca1P48754 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Brca1P48754 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Brca1P48754 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Brca1P48754 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Brca1P48754 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Brca1P48754 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Brca1P48754 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC21.21■□□□□ 0.99
Brca1P48754 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Brca1P48754 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Brca1P48754 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Brca1P48754 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Brca1P48754 Zfp783-201ENSMUST00000095946 670 ntBASIC21.21■□□□□ 0.99
Brca1P48754 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC21.2■□□□□ 0.98
Brca1P48754 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Brca1P48754 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Brca1P48754 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Brca1P48754 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC21.2■□□□□ 0.98
Brca1P48754 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Brca1P48754 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Brca1P48754 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Brca1P48754 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Brca1P48754 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Brca1P48754 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Brca1P48754 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
Brca1P48754 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Brca1P48754 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Brca1P48754 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Brca1P48754 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Brca1P48754 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Brca1P48754 Gm3375-201ENSMUST00000203929 796 ntBASIC21.19■□□□□ 0.98
Brca1P48754 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Brca1P48754 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC21.19■□□□□ 0.98
Brca1P48754 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Brca1P48754 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Brca1P48754 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Brca1P48754 Gm13559-201ENSMUST00000120476 863 ntBASIC21.18■□□□□ 0.98
Brca1P48754 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Brca1P48754 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC21.18■□□□□ 0.98
Brca1P48754 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.18■□□□□ 0.98
Brca1P48754 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Brca1P48754 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Brca1P48754 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Brca1P48754 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Brca1P48754 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Brca1P48754 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC21.18■□□□□ 0.98
Brca1P48754 Gm11539-201ENSMUST00000119837 557 ntBASIC21.18■□□□□ 0.98
Brca1P48754 Gm13436-201ENSMUST00000120418 567 ntBASIC21.18■□□□□ 0.98
Brca1P48754 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Brca1P48754 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Brca1P48754 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Brca1P48754 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Brca1P48754 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Brca1P48754 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Brca1P48754 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms