Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LmnaP48678 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LmnaP48678 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LmnaP48678 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LmnaP48678 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LmnaP48678 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LmnaP48678 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LmnaP48678 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.25■□□□□ 0.67
LmnaP48678 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.25■□□□□ 0.67
LmnaP48678 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LmnaP48678 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LmnaP48678 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LmnaP48678 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LmnaP48678 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LmnaP48678 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
LmnaP48678 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.24■□□□□ 0.67
LmnaP48678 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.24■□□□□ 0.67
LmnaP48678 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.24■□□□□ 0.67
LmnaP48678 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
LmnaP48678 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
LmnaP48678 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
LmnaP48678 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LmnaP48678 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LmnaP48678 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LmnaP48678 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
LmnaP48678 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
LmnaP48678 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LmnaP48678 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.23■□□□□ 0.67
LmnaP48678 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.23■□□□□ 0.67
LmnaP48678 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
LmnaP48678 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LmnaP48678 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.23■□□□□ 0.67
LmnaP48678 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
LmnaP48678 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LmnaP48678 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LmnaP48678 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LmnaP48678 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LmnaP48678 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LmnaP48678 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
LmnaP48678 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LmnaP48678 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.22■□□□□ 0.67
LmnaP48678 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
LmnaP48678 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LmnaP48678 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LmnaP48678 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LmnaP48678 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.22■□□□□ 0.67
LmnaP48678 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.22■□□□□ 0.67
LmnaP48678 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LmnaP48678 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.22■□□□□ 0.67
LmnaP48678 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
LmnaP48678 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LmnaP48678 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LmnaP48678 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LmnaP48678 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LmnaP48678 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LmnaP48678 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
LmnaP48678 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LmnaP48678 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LmnaP48678 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LmnaP48678 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
LmnaP48678 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.21■□□□□ 0.67
LmnaP48678 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LmnaP48678 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LmnaP48678 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LmnaP48678 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LmnaP48678 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LmnaP48678 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LmnaP48678 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LmnaP48678 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LmnaP48678 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LmnaP48678 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LmnaP48678 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LmnaP48678 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
LmnaP48678 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.2■□□□□ 0.66
LmnaP48678 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LmnaP48678 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.2■□□□□ 0.66
LmnaP48678 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LmnaP48678 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LmnaP48678 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LmnaP48678 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LmnaP48678 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
LmnaP48678 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LmnaP48678 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
LmnaP48678 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LmnaP48678 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LmnaP48678 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LmnaP48678 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
LmnaP48678 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LmnaP48678 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LmnaP48678 Gm6211-202ENSMUST00000167849 925 ntBASIC19.19■□□□□ 0.66
LmnaP48678 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LmnaP48678 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LmnaP48678 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
LmnaP48678 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LmnaP48678 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LmnaP48678 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LmnaP48678 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LmnaP48678 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LmnaP48678 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LmnaP48678 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms