Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx2-6P43688 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx2-6P43688 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx2-6P43688 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx2-6P43688 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx2-6P43688 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Nkx2-6P43688 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx2-6P43688 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx2-6P43688 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx2-6P43688 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-6P43688 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-6P43688 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-6P43688 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-6P43688 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-6P43688 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Nkx2-6P43688 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-6P43688 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Nkx2-6P43688 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-6P43688 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.65■□□□□ 0.42
Nkx2-6P43688 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.65■□□□□ 0.42
Nkx2-6P43688 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-6P43688 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.65■□□□□ 0.42
Nkx2-6P43688 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx2-6P43688 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Nkx2-6P43688 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Nkx2-6P43688 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-6P43688 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-6P43688 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.64■□□□□ 0.41
Nkx2-6P43688 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-6P43688 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-6P43688 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-6P43688 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.64■□□□□ 0.41
Nkx2-6P43688 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-6P43688 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC17.64■□□□□ 0.41
Nkx2-6P43688 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-6P43688 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-6P43688 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-6P43688 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Nkx2-6P43688 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx2-6P43688 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC17.63■□□□□ 0.41
Nkx2-6P43688 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-6P43688 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-6P43688 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.63■□□□□ 0.41
Nkx2-6P43688 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Nkx2-6P43688 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-6P43688 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx2-6P43688 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Nkx2-6P43688 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Nkx2-6P43688 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-6P43688 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-6P43688 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Nkx2-6P43688 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.62■□□□□ 0.41
Nkx2-6P43688 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-6P43688 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-6P43688 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.62■□□□□ 0.41
Nkx2-6P43688 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-6P43688 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.62■□□□□ 0.41
Nkx2-6P43688 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Nkx2-6P43688 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-6P43688 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-6P43688 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx2-6P43688 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Nkx2-6P43688 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-6P43688 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-6P43688 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.61■□□□□ 0.41
Nkx2-6P43688 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.61■□□□□ 0.41
Nkx2-6P43688 Gm10252-201ENSMUST00000209541 832 ntBASIC17.61■□□□□ 0.41
Nkx2-6P43688 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-6P43688 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-6P43688 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-6P43688 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-6P43688 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx2-6P43688 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx2-6P43688 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Nkx2-6P43688 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Nkx2-6P43688 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx2-6P43688 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Nkx2-6P43688 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Nkx2-6P43688 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx2-6P43688 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx2-6P43688 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx2-6P43688 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx2-6P43688 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx2-6P43688 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx2-6P43688 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-6P43688 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-6P43688 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.59■□□□□ 0.41
Nkx2-6P43688 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-6P43688 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-6P43688 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-6P43688 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-6P43688 Gm2559-201ENSMUST00000201323 363 ntBASIC17.59■□□□□ 0.41
Nkx2-6P43688 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-6P43688 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Nkx2-6P43688 Gm10812-201ENSMUST00000099864 546 ntBASIC17.59■□□□□ 0.41
Nkx2-6P43688 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-6P43688 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-6P43688 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-6P43688 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx2-6P43688 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms