Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hist1h1aP43275 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Hist1h1aP43275 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h1aP43275 Gm19439-201ENSMUST00000198195 2273 ntBASIC15.38■□□□□ 0.05
Hist1h1aP43275 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Hist1h1aP43275 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h1aP43275 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h1aP43275 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h1aP43275 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h1aP43275 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h1aP43275 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h1aP43275 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h1aP43275 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h1aP43275 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h1aP43275 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h1aP43275 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h1aP43275 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h1aP43275 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h1aP43275 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h1aP43275 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h1aP43275 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Hist1h1aP43275 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h1aP43275 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h1aP43275 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Hist1h1aP43275 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h1aP43275 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h1aP43275 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.38■□□□□ 0.05
Hist1h1aP43275 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h1aP43275 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h1aP43275 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h1aP43275 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h1aP43275 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist1h1aP43275 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hist1h1aP43275 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hist1h1aP43275 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hist1h1aP43275 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hist1h1aP43275 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hist1h1aP43275 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hist1h1aP43275 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.37■□□□□ 0.05
Hist1h1aP43275 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Hist1h1aP43275 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hist1h1aP43275 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Hist1h1aP43275 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Hist1h1aP43275 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hist1h1aP43275 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Hist1h1aP43275 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Hist1h1aP43275 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hist1h1aP43275 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hist1h1aP43275 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Hist1h1aP43275 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Hist1h1aP43275 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Hist1h1aP43275 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hist1h1aP43275 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hist1h1aP43275 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Hist1h1aP43275 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hist1h1aP43275 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hist1h1aP43275 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Hist1h1aP43275 Gm9847-201ENSMUST00000052528 599 ntBASIC15.36■□□□□ 0.05
Hist1h1aP43275 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hist1h1aP43275 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Hist1h1aP43275 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.36■□□□□ 0.05
Hist1h1aP43275 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Hist1h1aP43275 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Hist1h1aP43275 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Hist1h1aP43275 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hist1h1aP43275 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.35■□□□□ 0.05
Hist1h1aP43275 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hist1h1aP43275 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
Hist1h1aP43275 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hist1h1aP43275 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Hist1h1aP43275 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hist1h1aP43275 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Hist1h1aP43275 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Hist1h1aP43275 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hist1h1aP43275 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hist1h1aP43275 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC15.35■□□□□ 0.05
Hist1h1aP43275 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC15.35■□□□□ 0.05
Hist1h1aP43275 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Hist1h1aP43275 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hist1h1aP43275 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hist1h1aP43275 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hist1h1aP43275 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hist1h1aP43275 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.35■□□□□ 0.05
Hist1h1aP43275 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hist1h1aP43275 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Hist1h1aP43275 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.35■□□□□ 0.05
Hist1h1aP43275 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hist1h1aP43275 Gm42939-201ENSMUST00000197514 2205 ntBASIC15.35■□□□□ 0.05
Hist1h1aP43275 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hist1h1aP43275 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hist1h1aP43275 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hist1h1aP43275 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hist1h1aP43275 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Hist1h1aP43275 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hist1h1aP43275 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hist1h1aP43275 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.34■□□□□ 0.05
Hist1h1aP43275 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Hist1h1aP43275 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.34■□□□□ 0.05
Hist1h1aP43275 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hist1h1aP43275 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms