Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msh2P43247 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msh2P43247 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.23■□□□□ 0.67
Msh2P43247 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Msh2P43247 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msh2P43247 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msh2P43247 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Msh2P43247 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Msh2P43247 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Msh2P43247 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Msh2P43247 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Msh2P43247 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Msh2P43247 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Msh2P43247 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.22■□□□□ 0.67
Msh2P43247 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.22■□□□□ 0.67
Msh2P43247 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Msh2P43247 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Msh2P43247 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Msh2P43247 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Msh2P43247 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.22■□□□□ 0.67
Msh2P43247 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Msh2P43247 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Msh2P43247 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Msh2P43247 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Msh2P43247 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Msh2P43247 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
Msh2P43247 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Msh2P43247 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Msh2P43247 Gm11421-201ENSMUST00000122124 294 ntBASIC19.21■□□□□ 0.67
Msh2P43247 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.21■□□□□ 0.67
Msh2P43247 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Msh2P43247 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Msh2P43247 Gm40848-201ENSMUST00000221998 324 ntBASIC19.21■□□□□ 0.67
Msh2P43247 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Msh2P43247 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.21■□□□□ 0.67
Msh2P43247 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Msh2P43247 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Msh2P43247 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Msh2P43247 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Msh2P43247 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Msh2P43247 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Msh2P43247 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Msh2P43247 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Msh2P43247 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Msh2P43247 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Msh2P43247 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Msh2P43247 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Msh2P43247 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Msh2P43247 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Msh2P43247 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Msh2P43247 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Msh2P43247 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Msh2P43247 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
Msh2P43247 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Msh2P43247 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Msh2P43247 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Msh2P43247 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Msh2P43247 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Msh2P43247 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Msh2P43247 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.19■□□□□ 0.66
Msh2P43247 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.18■□□□□ 0.66
Msh2P43247 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.18■□□□□ 0.66
Msh2P43247 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Msh2P43247 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Msh2P43247 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Msh2P43247 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Msh2P43247 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.18■□□□□ 0.66
Msh2P43247 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Msh2P43247 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Msh2P43247 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Msh2P43247 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Msh2P43247 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Msh2P43247 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Msh2P43247 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.18■□□□□ 0.66
Msh2P43247 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Msh2P43247 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Msh2P43247 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Msh2P43247 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Msh2P43247 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Msh2P43247 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.17■□□□□ 0.66
Msh2P43247 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.17■□□□□ 0.66
Msh2P43247 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.17■□□□□ 0.66
Msh2P43247 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Msh2P43247 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Msh2P43247 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Msh2P43247 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Msh2P43247 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Msh2P43247 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Msh2P43247 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Msh2P43247 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Msh2P43247 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.16■□□□□ 0.66
Msh2P43247 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Msh2P43247 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Msh2P43247 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Msh2P43247 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Msh2P43247 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Msh2P43247 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Msh2P43247 Gm43060-201ENSMUST00000200621 289 ntBASIC19.16■□□□□ 0.66
Msh2P43247 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.16■□□□□ 0.66
Msh2P43247 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms