Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-2P42586 Gm8495-201ENSMUST00000188740 694 ntBASIC17.18■□□□□ 0.34
Nkx2-2P42586 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-2P42586 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.18■□□□□ 0.34
Nkx2-2P42586 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-2P42586 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-2P42586 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-2P42586 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-2P42586 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-2P42586 Gm10167-201ENSMUST00000150411 1479 ntBASIC17.18■□□□□ 0.34
Nkx2-2P42586 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Nkx2-2P42586 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-2P42586 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-2P42586 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-2P42586 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Nkx2-2P42586 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Nkx2-2P42586 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-2P42586 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-2P42586 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-2P42586 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-2P42586 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-2P42586 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Nkx2-2P42586 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Nkx2-2P42586 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-2P42586 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-2P42586 AV356131-201ENSMUST00000206201 750 ntBASIC17.17■□□□□ 0.34
Nkx2-2P42586 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-2P42586 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-2P42586 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-2P42586 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-2P42586 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-2P42586 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-2P42586 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Nkx2-2P42586 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-2P42586 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-2P42586 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Nkx2-2P42586 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-2P42586 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-2P42586 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-2P42586 Gm7514-201ENSMUST00000209475 934 ntBASIC17.16■□□□□ 0.34
Nkx2-2P42586 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-2P42586 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Nkx2-2P42586 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-2P42586 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-2P42586 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-2P42586 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-2P42586 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-2P42586 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-2P42586 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-2P42586 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-2P42586 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Nkx2-2P42586 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Nkx2-2P42586 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx2-2P42586 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.15■□□□□ 0.34
Nkx2-2P42586 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.15■□□□□ 0.34
Nkx2-2P42586 Gm10849-201ENSMUST00000100397 618 ntBASIC17.15■□□□□ 0.34
Nkx2-2P42586 Gm15039-201ENSMUST00000118914 875 ntBASIC17.15■□□□□ 0.34
Nkx2-2P42586 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx2-2P42586 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.15■□□□□ 0.34
Nkx2-2P42586 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx2-2P42586 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Nkx2-2P42586 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.15■□□□□ 0.34
Nkx2-2P42586 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.14■□□□□ 0.33
Nkx2-2P42586 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.14■□□□□ 0.33
Nkx2-2P42586 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Nkx2-2P42586 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-2P42586 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-2P42586 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-2P42586 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-2P42586 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.14■□□□□ 0.33
Nkx2-2P42586 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-2P42586 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-2P42586 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-2P42586 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Nkx2-2P42586 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-2P42586 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-2P42586 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-2P42586 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-2P42586 Gm26571-201ENSMUST00000181399 666 ntBASIC17.13■□□□□ 0.33
Nkx2-2P42586 Gm6420-201ENSMUST00000193885 723 ntBASIC17.13■□□□□ 0.33
Nkx2-2P42586 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-2P42586 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.13■□□□□ 0.33
Nkx2-2P42586 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-2P42586 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-2P42586 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-2P42586 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-2P42586 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Nkx2-2P42586 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-2P42586 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.12■□□□□ 0.33
Nkx2-2P42586 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Nkx2-2P42586 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-2P42586 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-2P42586 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-2P42586 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-2P42586 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-2P42586 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-2P42586 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-2P42586 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-2P42586 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Nkx2-2P42586 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms