Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox6P40645 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Sox6P40645 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Sox6P40645 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Sox6P40645 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox6P40645 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox6P40645 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox6P40645 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox6P40645 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox6P40645 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox6P40645 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox6P40645 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox6P40645 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox6P40645 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.49■□□□□ 0.39
Sox6P40645 Grk6-206ENSMUST00000224995 2971 ntBASIC17.49■□□□□ 0.39
Sox6P40645 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Sox6P40645 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.48■□□□□ 0.39
Sox6P40645 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Sox6P40645 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox6P40645 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox6P40645 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox6P40645 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
Sox6P40645 Smad6-203ENSMUST00000179458 273 ntBASIC17.48■□□□□ 0.39
Sox6P40645 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.48■□□□□ 0.39
Sox6P40645 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Sox6P40645 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Sox6P40645 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox6P40645 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox6P40645 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
Sox6P40645 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Sox6P40645 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox6P40645 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Sox6P40645 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox6P40645 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox6P40645 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox6P40645 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Sox6P40645 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.47■□□□□ 0.39
Sox6P40645 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sox6P40645 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.47■□□□□ 0.39
Sox6P40645 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.47■□□□□ 0.39
Sox6P40645 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox6P40645 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox6P40645 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sox6P40645 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox6P40645 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox6P40645 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Sox6P40645 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Sox6P40645 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sox6P40645 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.47■□□□□ 0.39
Sox6P40645 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox6P40645 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox6P40645 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox6P40645 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Sox6P40645 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox6P40645 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.46■□□□□ 0.39
Sox6P40645 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox6P40645 AA386476-201ENSMUST00000098781 1665 ntBASIC17.46■□□□□ 0.39
Sox6P40645 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox6P40645 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox6P40645 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox6P40645 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Sox6P40645 Gm26833-201ENSMUST00000180899 440 ntBASIC17.46■□□□□ 0.39
Sox6P40645 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox6P40645 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox6P40645 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox6P40645 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox6P40645 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sox6P40645 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Sox6P40645 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Sox6P40645 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Sox6P40645 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox6P40645 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sox6P40645 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Sox6P40645 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sox6P40645 Gm11421-201ENSMUST00000122124 294 ntBASIC17.45■□□□□ 0.38
Sox6P40645 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sox6P40645 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox6P40645 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox6P40645 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.45■□□□□ 0.38
Sox6P40645 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Sox6P40645 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sox6P40645 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sox6P40645 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox6P40645 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox6P40645 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Sox6P40645 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Sox6P40645 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Sox6P40645 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox6P40645 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Sox6P40645 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox6P40645 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox6P40645 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Sox6P40645 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.44■□□□□ 0.38
Sox6P40645 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sox6P40645 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox6P40645 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sox6P40645 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
Sox6P40645 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sox6P40645 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.43■□□□□ 0.38
Sox6P40645 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 100.4 ms