Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rfc1P35601 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.63■□□□□ 0.73
Rfc1P35601 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rfc1P35601 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rfc1P35601 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.63■□□□□ 0.73
Rfc1P35601 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
Rfc1P35601 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Rfc1P35601 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rfc1P35601 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rfc1P35601 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rfc1P35601 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rfc1P35601 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rfc1P35601 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rfc1P35601 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Rfc1P35601 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.62■□□□□ 0.73
Rfc1P35601 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rfc1P35601 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rfc1P35601 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rfc1P35601 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rfc1P35601 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Rfc1P35601 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rfc1P35601 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.62■□□□□ 0.73
Rfc1P35601 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.62■□□□□ 0.73
Rfc1P35601 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.62■□□□□ 0.73
Rfc1P35601 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.62■□□□□ 0.73
Rfc1P35601 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Rfc1P35601 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rfc1P35601 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rfc1P35601 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.62■□□□□ 0.73
Rfc1P35601 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.62■□□□□ 0.73
Rfc1P35601 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.62■□□□□ 0.73
Rfc1P35601 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rfc1P35601 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfc1P35601 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfc1P35601 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfc1P35601 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfc1P35601 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfc1P35601 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Rfc1P35601 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfc1P35601 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfc1P35601 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.61■□□□□ 0.73
Rfc1P35601 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfc1P35601 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Rfc1P35601 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rfc1P35601 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Rfc1P35601 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rfc1P35601 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rfc1P35601 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rfc1P35601 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.6■□□□□ 0.73
Rfc1P35601 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.6■□□□□ 0.73
Rfc1P35601 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.6■□□□□ 0.73
Rfc1P35601 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.6■□□□□ 0.73
Rfc1P35601 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rfc1P35601 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.6■□□□□ 0.73
Rfc1P35601 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rfc1P35601 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rfc1P35601 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Rfc1P35601 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Rfc1P35601 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC19.6■□□□□ 0.73
Rfc1P35601 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rfc1P35601 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rfc1P35601 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rfc1P35601 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rfc1P35601 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rfc1P35601 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rfc1P35601 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rfc1P35601 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rfc1P35601 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rfc1P35601 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rfc1P35601 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rfc1P35601 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rfc1P35601 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rfc1P35601 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Rfc1P35601 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rfc1P35601 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rfc1P35601 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rfc1P35601 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Rfc1P35601 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rfc1P35601 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rfc1P35601 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.58■□□□□ 0.73
Rfc1P35601 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rfc1P35601 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Rfc1P35601 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rfc1P35601 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rfc1P35601 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rfc1P35601 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.58■□□□□ 0.72
Rfc1P35601 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Rfc1P35601 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rfc1P35601 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rfc1P35601 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC19.57■□□□□ 0.72
Rfc1P35601 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
Rfc1P35601 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rfc1P35601 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Rfc1P35601 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rfc1P35601 AA386476-201ENSMUST00000098781 1665 ntBASIC19.56■□□□□ 0.72
Rfc1P35601 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rfc1P35601 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rfc1P35601 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rfc1P35601 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rfc1P35601 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms